| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1419 |
|---|
| Symbol | |
|---|
| ID | 6110347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1559973 |
|---|
| End bp | 1560863 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641621193 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001748293 |
|---|
| Protein GI | 170720605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.12984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCTC AGAATCACGG CGTTACTGAC ACACCGTTGG TGACAGTGAT CATCGCGTCC
TACAACCACG CGCGTTACAT CGAAGCCAGC ATCAACAGCG TCGTCAACCA GACCTACAAG
AACATCGAAC TTCTAGTAGT GGACGATGGT TCCAAGGACG ACAGCCCTGC AGTGCTCAAG
CGGCTGCAGG CACAACACGG CTTCGATCTG CGCTTCCAGG CCAACCAAGG CCTGGCGCGT
ACCCTGAACG ACGCGATTGC ACGCGCCAAG GGCGACCTGA TCGTGCCTTT CGGCTCAGAC
GACATCATGC TGCCCCACCG TATCGCCACC CAGGTGGAGT ACATGCACGG CAAGCCTGAA
GTAGGCATCT GTTCGGCCAA CATCGAAACC ATCGACCATG ACGGCAAGGT GATGGGCGCG
CGCGAACAGC GTAAACGCAA CCTGCCCTTC CGCCGCCTGG ACTTCGACGA CCTGTGGCTG
GACCGCAAGC CAGGCCCCAT GGCTGCCACC CTGATGCTGC GCCGCGAAGC CCTGGAGAAG
GTCGGTGGCT TCAATGCCGA TATCCGCCTG GAAGACGTGT ACATAGAACT GTCGATCGCA
CGGGCCGGTT ACTACATCGA CGTGCTGGGC GAGGTGCTGG CGCAGTACCG CGACCACCCG
ACCAACACCT TCAAGAACGG CCGCTTCATG GTCGACAACG TGCTCAAGAC CTACGCACAC
TTCAAAGACC ACCCGCAGTA CGAGCAGGTG TGCATGAAGT TCCGCAACTC CATGGTGCTC
AAGTACGCCA ACCGCGACAA GCAACTGACG CGGGAGATCC TGGCTGATAT CCCGCTCAAG
TACTGGAACA GAAAGACCTT GCGTGGCCTG TGGCGGCTGC TCTGGTCTTA A
|
|---|
| Protein sequence | MVSQNHGVTD TPLVTVIIAS YNHARYIEAS INSVVNQTYK NIELLVVDDG SKDDSPAVLK
RLQAQHGFDL RFQANQGLAR TLNDAIARAK GDLIVPFGSD DIMLPHRIAT QVEYMHGKPE
VGICSANIET IDHDGKVMGA REQRKRNLPF RRLDFDDLWL DRKPGPMAAT LMLRREALEK
VGGFNADIRL EDVYIELSIA RAGYYIDVLG EVLAQYRDHP TNTFKNGRFM VDNVLKTYAH
FKDHPQYEQV CMKFRNSMVL KYANRDKQLT REILADIPLK YWNRKTLRGL WRLLWS
|
|---|
| |