| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1409 |
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| Symbol | |
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| ID | 6110337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1549756 |
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| End bp | 1550652 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621183 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001748283 |
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| Protein GI | 170720595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.329803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGG CCAGTAAACG CGCGCTTATC ACAGGGATTC AGGGTTTCAC CGGCCGCTAC
ATGGCGGCCG AGTTGCGAGC CAGTGGCTAT GAAGTAGTCG GTACGGGCAG CCAGGTGCTG
GATGCCCCGG ACTACCACCA GGTCGACCTT ACCGACGGCC CGGGCCTGCG TGCGTTGCTG
GCCGAAGTGC AGCCGGATGT CATCGTGCAT CTGGCTGCCA TTGCGTTTGT CGGGCACGGC
GCAGCCGATG CGTTCTACCA GGTCAACCTG GTAGGCACGC GCAACCTGCT CGAAGCCATC
GCAGCCTGCG GCAAGGCACC GGACTGTGTG CTGATTGCCA GCAGTGCCAA CGTATATGGC
AATGTTTCCG AAGGGATGCT GGGCGAGCAG ACGCCGCCGG CGCCCGCCAA TGATTACGCG
GTCAGCAAGC TGGCCATGGA ATACATGGCG CGGTTGTGGT TCGACCGCCT GCCAATCGTC
ATCACGCGCC CCTTCAATTA CACAGGTGTT GGGCAGGCAG AAAACTTCCT GCTGCCCAAG
ATCGTTTCGC ACTTCAGCCG CAAGGCAGGC ACCATCGAAC TGGGCAACCT CGACGTATGG
CGCGATTTCA GCGACGTACG TGCGGTGGTG CAGGCTTACC GCGGGCTGAT CGAAGCGCGC
CCGCTGGGGC AGACGGTGAA CGTCAGCTCC GGGCAAACCC ATTCGCTGCG CGAAGTCATC
GCTAAATGCT CGGCCATTAC CGGGCACCAG ATCGACGTGC AGGTGAACCC GGCCTTTGTC
CGCGCCAACG AGGTCAAGAC CTTGTGCGGC GACAACAGCC TGCTGCGTAG CCTGGTACCC
GGCTGGCAAA CCCCGACACT GGATGAAACC CTGGGTTGGA TGCTTGCGGG TAAATGA
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| Protein sequence | MQMASKRALI TGIQGFTGRY MAAELRASGY EVVGTGSQVL DAPDYHQVDL TDGPGLRALL
AEVQPDVIVH LAAIAFVGHG AADAFYQVNL VGTRNLLEAI AACGKAPDCV LIASSANVYG
NVSEGMLGEQ TPPAPANDYA VSKLAMEYMA RLWFDRLPIV ITRPFNYTGV GQAENFLLPK
IVSHFSRKAG TIELGNLDVW RDFSDVRAVV QAYRGLIEAR PLGQTVNVSS GQTHSLREVI
AKCSAITGHQ IDVQVNPAFV RANEVKTLCG DNSLLRSLVP GWQTPTLDET LGWMLAGK
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