Gene PputW619_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1397 
Symbol 
ID6110325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1529255 
End bp1530331 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID641621171 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001748271 
Protein GI170720583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCT TAGTAACCGG TGGTGCCGGG TTCATTGGCT CGGCAGTTGT ACGTCACATC 
ATCTCGAACA CTGATGACTC GGTCATCAAC GTCGACAAGC TGACCTATGC CGGCAACCTG
GAGTCGCTCC AGTCGGTCGA CCAAGACACG CGCTATGCAT TCGAGCGCGT CGATATCTGC
GACCGCGGCG AACTCGACCG GGTGTTCCGC GAGCACCAGC CTGACGCTGT GATGCACCTG
GCCGCAGAAT CCCACGTCGA CCGCTCGATC AGCGGCCCGT CCGAATTCAT CCAGACCAAC
ATCATCGGCA CATACAACCT GCTGGAAGCA GCGCGTGGGT ACTGGAATTC CTTGGATGAA
ACGCGCAAGG CGGCATTCCG GTTCCACCAC ATTTCCACTG ACGAAGTGTA CGGAGACCTT
GAAGGCCCGG AAGACTTGTT CACCGAGACC ACACCGTACC AGCCAAGCTC GCCCTACTCA
GCCAGCAAGG CCAGTTCCGA CCATTTGGTC CGCGCCTGGG CCCGTACCTA CGGCCTGCCG
ACCTTGGTTA CCAATTGCTC GAACAACTAT GGCCCGTACC ACTTCCCCGA GAAGTTGATC
CCGCTGGTCA TCCTCAACGC ACTGGAAGGC AAGCCGCTGC CTATCTACGG CAAAGGCGAC
CAGATCCGTG ACTGGCTGTA CGTCGAAGAC CACGCCCGGG CGCTGTACAA GGTAGTTACC
GAAGGTGAAG TAGGCCAGAC CTACAACATT GGCGGCCATA ACGAGAAGCA GAACATCGAG
GTGGTGCGTA CCGTTTGTGC ATTGCTTGAC GAACTGCGCC CTGAGTCGGC ATTCCGCCCG
CACGTCGACC TGCTGACCTA CGTGCAAGAC CGCCCGGGCC ATGACCTGCG GTATGCCATC
GACGCCAGCA AGATCCAACG TGAACTGGGC TGGGTGCCTG AAGAAACCTT CGAGTCGGGC
ATCCGCAAGA CGGTGCAGTG GTACTTGGAC AACCCAGAGT GGGTCGCTCA CGTAAAAAGC
GGCAGCTACC AGCAATGGAT CGACACAAAT TACAACGCAC GTGCGGGTAA GGCATGA
 
Protein sequence
MKILVTGGAG FIGSAVVRHI ISNTDDSVIN VDKLTYAGNL ESLQSVDQDT RYAFERVDIC 
DRGELDRVFR EHQPDAVMHL AAESHVDRSI SGPSEFIQTN IIGTYNLLEA ARGYWNSLDE
TRKAAFRFHH ISTDEVYGDL EGPEDLFTET TPYQPSSPYS ASKASSDHLV RAWARTYGLP
TLVTNCSNNY GPYHFPEKLI PLVILNALEG KPLPIYGKGD QIRDWLYVED HARALYKVVT
EGEVGQTYNI GGHNEKQNIE VVRTVCALLD ELRPESAFRP HVDLLTYVQD RPGHDLRYAI
DASKIQRELG WVPEETFESG IRKTVQWYLD NPEWVAHVKS GSYQQWIDTN YNARAGKA