| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1394 |
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| Symbol | |
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| ID | 6110322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1526918 |
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| End bp | 1527466 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641621168 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001748268 |
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| Protein GI | 170720580 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTA TTCCTTTGGC CATCCCGGAT GTCTTTCTGT TCACTCCCAA GGTCTTCGGT
GACGAGCGTG GCTTTTTCTT CGAAAGCTTC AACGCCAATG TCTTCAAGGA AGTCACCGGC
CTGCAACCAG ACTTCGTTCA GGACAACCAC TCCCGCTCTG TGAAAGGCGT GCTACGCGGC
CTTCACTACC AGCTGCCGCC ACATGCCCAA GGCAAATTGG TGCGTGTAGT ACAAGGTGAA
GTGTTCGACG TGGCGGTGGA TATCCGCCGC TCCTCCCCTA CTTTTGGCCA GTGGGTTGGT
GCGGTGCTTT CCGCCGAGAA CAAGAACCAG CTGTGGATTC CGCCAGGCTT TGCCCACGGC
TTCGTGACTT TGAGCGATAC AGCCGAGTTT CTCTACAAAA CGACCGATTT CTACTCACCT
AGCAGCGAGC GCTGCCTTGC TTGGAATGAT CCAGAAATCG GTATCGAGTG GCCAATCGAC
TTTGTGCCTA GCCTATCTGG AAAAGACCAA CTTGGTTTGG CATTAAGCGA CTCGGACTTA
TTCGATTGA
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| Protein sequence | MHAIPLAIPD VFLFTPKVFG DERGFFFESF NANVFKEVTG LQPDFVQDNH SRSVKGVLRG
LHYQLPPHAQ GKLVRVVQGE VFDVAVDIRR SSPTFGQWVG AVLSAENKNQ LWIPPGFAHG
FVTLSDTAEF LYKTTDFYSP SSERCLAWND PEIGIEWPID FVPSLSGKDQ LGLALSDSDL
FD
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