Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1378 |
Symbol | cmk |
ID | 6110306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1505822 |
End bp | 1506508 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641621152 |
Product | cytidylate kinase |
Protein accession | YP_001748252 |
Protein GI | 170720564 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.925348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCTC AAGCGCCGGT CATCACCATC GATGGCCCGA GCGGCTCGGG CAAGGGCACG GTCGCAGGCC TGTTGGCGCG TGAACTGGGC TGGCGGCTGC TGGATTCCGG CGCGCTTTAC CGTCTGCTGG CGTTCAACGC CAGCAACCAC GGTGTCGACC TGACCAACGA AGAGCTGCTC AAGGCCCTGG CCGCCCATCT GGATGTGCAA TTCATCGCCG CCGAGCCGGG TAAGCTGCAA CAGATCATTC TGGAGGGTGA GGACGTCAGC AATGTCATCC GCACCGAGAC GGTCGGTGCC GGGGCCTCGA TGGTCGCGTC CCTGCCGGCA GTGCGTGAAG CCCTGCTGCA GCGCCAGCGC GCCTTCCGCG AAACACCCGG CCTGATCGCC GATGGCCGCG ACATGGGCAC CGTGGTGTTC CCGGACGCGC CGCTTAAGGT GTTTTTGACC GCCAGTGCCG AGGAGCGTGC CCGTCGCCGC TACCTGCAGT TGAAGGGCAA AGGCGAAGAT GTTAGTCTGT CGAGTCTGCT AGATGAGATT CGTGCGCGCG ATGAGCGCGA CACCCAGCGC GCAGTGGCCC CGCTCAAGCC GGCGGCCGAT GCCATTCAGC TGGACTCCAC GGAGCTGTCC ATCGAGCAGG TGCTGCACCG TATCAGGAGC GAGCTCGCCC AGCGCGACTT GGTCTGA
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Protein sequence | MNSQAPVITI DGPSGSGKGT VAGLLARELG WRLLDSGALY RLLAFNASNH GVDLTNEELL KALAAHLDVQ FIAAEPGKLQ QIILEGEDVS NVIRTETVGA GASMVASLPA VREALLQRQR AFRETPGLIA DGRDMGTVVF PDAPLKVFLT ASAEERARRR YLQLKGKGED VSLSSLLDEI RARDERDTQR AVAPLKPAAD AIQLDSTELS IEQVLHRIRS ELAQRDLV
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