| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1370 |
|---|
| Symbol | |
|---|
| ID | 6110298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1494563 |
|---|
| End bp | 1495303 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641621144 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001748244 |
|---|
| Protein GI | 170720556 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT ATACCGCCCG CCCCGACCTG CTCAAGGGCC GCGTCATCAT GGTCACCGGC
GCTGGCCGTG GCATCGGTGC AGCCGCCGCC AAGGCTTATG CCGCCTTGGG CGCCACTGTG
CTGCTGCTGG GCAAGACCGA AGCCAACCTG AACGAGGTCT ACGATGAAAT CGAGGCCGCC
GGCCACCCGC AGCCGGTGGT GATCCCGTTC AACCTGGAAA CCGCCCTGCC CCACCAGTAC
GACGAACTGG CTGCGATGGT CGAGGAACAG TTCGGCCGCC TGGACGGCCT GCTCAACAAT
GCCTCGATCA TCGGCCCGCG CACCCCGCTC GAGCAGCTCT CGGGCGACAA TTTCATGCGG
GTGATGCACA TCAACGTCGA TGCCACGTTC ATGCTCACCA GCACCCTGCT GCCGCTGCTC
AAGCTGTCGG AGGACGCCTC GGTGGTGTTC ACCTCCAGCA GTGTCGGGCG CAAGGGCCGG
GCTTACTGGG GCGCTTATGG CGTGTCCAAA TTCGCTACCG AAGGCCTGAT GCAGACTTTG
GCAGACGAAC TGGAAGGTGT GGCGCCGGTG CGCTCCAACA GTATCAACCC GGGGGCTACC
CGCACGGCCA TGCGGGCCCA GGCCTATCCG AGCGAGAACC CGCAGAACAA CCCGCTGCCT
GAAGAGATCA TGCCGGTGTA TCTGTACCTG ATGGGGCCGG ACAGTACCGG GGTGAACGGG
CAGGCCTTCA ACGCTCAGTA G
|
|---|
| Protein sequence | MFDYTARPDL LKGRVIMVTG AGRGIGAAAA KAYAALGATV LLLGKTEANL NEVYDEIEAA
GHPQPVVIPF NLETALPHQY DELAAMVEEQ FGRLDGLLNN ASIIGPRTPL EQLSGDNFMR
VMHINVDATF MLTSTLLPLL KLSEDASVVF TSSSVGRKGR AYWGAYGVSK FATEGLMQTL
ADELEGVAPV RSNSINPGAT RTAMRAQAYP SENPQNNPLP EEIMPVYLYL MGPDSTGVNG
QAFNAQ
|
|---|
| |