| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1368 |
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| Symbol | |
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| ID | 6110296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1491141 |
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| End bp | 1493597 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621142 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001748242 |
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| Protein GI | 170720554 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.567434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAC ATCGCACACT AGAGGCGCCA AGGCTGCTGG GTATCATCTG GCCCTTCGTC
GCCGTTGTAG TCTTCCAGGT CCTGCTGGGC AGCCTCAGCC TTTACGCGCT TTCGGCTGTG
CGTGCCTATG TCGCCGGCGA AAGCCTGTGG TCCAAGGCCC AGAAAGACGC TATCTATTAC
CTGAACCTGT ATGCCGAAAC TGGCGATGAG CGCACCTACC AGCGCTATCG CCAGGTCATC
ACTGTGCCCC ACGGTGACCG GCAGATGCGC GAGGTGCTCG ACCAGCCTGA TCCAGACCTT
GACGTCGCGC GCCAAGCCGT ACTGCAAGGC GGCAATCACC CCGACGACGT CGACCGCATC
ATCTGGTTCT ACCGCAATTT CAGCCAGATC AGCTACGTGC AGGCGGCGAT CGCCTACTGG
AATGTCGGTG ATGATTTCCT CAACCAGCTG GATGTGCTGG CCAACGAGAT GCGCGAGGGT
TTTGCCAAAG GCCAGGTCGG GCCGCGCCAG GTCAGCCAAT GGCGCGCCCG CATCGTCGCT
ATCAATGAAG GCGTGACACC GGCGGCCAAA GCCTTCAGCG ATGCCCTGGG TGAAGGGTCG
CGCATGCTGT TGCGGGTGTT GTTGGTCACC AACCTGCTCA CCGCACTGTT TCTCATCACC
TTTGCCTGGC GCCGTTCGAG CAAACTGCTG GCCCAGCGCC AGGCCTTCGC CAGCGCCCTG
CAGGAAGAAA AGGAGCGCGC ACAGATTACC CTGCAGGCGA TTGGCGATGC TGTGATCACC
ACCGATGTCG ATGGCAGCAT CGGCTACATG AACCCGGCGG CCGAGCAGCT TACCCATTGG
CAGGCAGGCC AGGCCCTGGG GCTGCCGTTG ACAGCACTGT TCAGCCTGGT GGACGAGCAG
GCCCAGAACG ACAGCAGCAC CCTGCTCGAA CAGGTGCTCA GCGGCAGCCT CAAGGGGGGC
GCCGAGCATG CACGGTTGAT CCAGCGCCTG GATGGCAGCA CGGTTGCGAT CAACCTGGTG
GGGTCGCCCA TCATCAGTGA CGGGCAGGTG GCTGGCATTG TCCTGGTGCT GCATGACATG
ACCCAGGAGC GCCAATACAT AGCCAACCTG TCCTGGCAGG CTACCCATGA CGCGCTGACC
GGCCTGGCCA ACCGCCGTGA ATTCGAGTAC CGCCTGGAGC AGGCACTGAA CGACCTCGTG
CGCCAGGGCG GGCGGCATTC GCTGATGTTC CTTGACCTCG ACCAGTTCAA GCTGGTCAAC
GATACCTGTG GGCATGCCGC CGGTGACGAA TTGCTGCGGC ACATCTGCGC CGTGCTGCAA
TCGGTGCTGC GCGAAGGCGA TACCCTGGCG CGGCTGGGGG GGGATGAGTT TGGCGTGCTG
CTGGAAAACT GCCCGGGCGA ACAGGCCGAG CGCATTGCCG AAAACCTGCG CCAGGCGGTG
CAAAGCCTGC ACTTCGTATG GAAAGGCAGG CCGTTCGTCA CCACTGTGAG TATCGGCCTG
GTGCACATGG CACAAGCCCC GGCCACGCTG GAAGCCTCCC TGCGGGCAGC GGACATGGCG
TGCTACATGG CCAAGGAGAA GGGCCGTAAC CGCATCCAGG TCTACCATTC CGATGACAGT
GAACTGTCGA TGCGGTTTGG TGAAATGGCC TGGATACAGC GCCTGCACGT CGCCCTGGAG
GAGAACCGCT TCTGCCTGTA CGCCCAGGAA ATCGCCGCAC TCACCGCCCT TGAAGGGCAG
GGGCATGTCG AGATTCTGTT GCGCCTGCAA GACGAAAGCG GCCGCACCAT CCTGCCTGAC
AGCTTCATCC CGGCGGCCGA GCGCTATGGC CTGATGACCG CTATCGACCG CTGGGTGGTG
CGCAATGTGT TTCAGGTCAT TCGCCAGTGT CTGGATGAGG GGCGCGAGGG CCCGCTGTCG
ATGTGTGCCA TCAACCTGTC GGGCTCGAGT ATCGGTGACG ACAAGTTCCT GGAGTACCTG
CAGCGCCTGT TCGTCGAATA TTCGATTCCG CCACGGCTGA TCTGCTTCGA GATCACCGAG
ACCAGTGCCA TTGCCAACCT CGGCAGTGCC ATCCGGTTCA TCAATGAATT GAAAGGGCTG
GGTTGCAAGT TCTCGCTGGA TGACTTTTGT GCCGGAATGT CGTCATTCGC TTATTTGAAA
CATTTACCCG TCGACTTCTT GAAGATCGAC GGAAGTTTTG TCAAAGATAT GCTTGATGAT
CCGGTCAACC GGGCCATGGT CGAAGTCATC AATCACATCG GCCACGTCAT GGGTAAACGG
ACCATTGCCG AGTTCGTTGA AACTCCGTTG ATCGAGCAGG CCTTGCAGGA GATCGGCGTG
GACTACGCCC AGGGCTATCT GATCGAAAGA CCGCAGGTAT TCACTTGCGA CAGCCTGCAG
CGCCAACGGA TTGCCGCACG GCCCCTGCTG CATCGGGCGC CTGGAACCTT TCGCTGA
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| Protein sequence | MKGHRTLEAP RLLGIIWPFV AVVVFQVLLG SLSLYALSAV RAYVAGESLW SKAQKDAIYY
LNLYAETGDE RTYQRYRQVI TVPHGDRQMR EVLDQPDPDL DVARQAVLQG GNHPDDVDRI
IWFYRNFSQI SYVQAAIAYW NVGDDFLNQL DVLANEMREG FAKGQVGPRQ VSQWRARIVA
INEGVTPAAK AFSDALGEGS RMLLRVLLVT NLLTALFLIT FAWRRSSKLL AQRQAFASAL
QEEKERAQIT LQAIGDAVIT TDVDGSIGYM NPAAEQLTHW QAGQALGLPL TALFSLVDEQ
AQNDSSTLLE QVLSGSLKGG AEHARLIQRL DGSTVAINLV GSPIISDGQV AGIVLVLHDM
TQERQYIANL SWQATHDALT GLANRREFEY RLEQALNDLV RQGGRHSLMF LDLDQFKLVN
DTCGHAAGDE LLRHICAVLQ SVLREGDTLA RLGGDEFGVL LENCPGEQAE RIAENLRQAV
QSLHFVWKGR PFVTTVSIGL VHMAQAPATL EASLRAADMA CYMAKEKGRN RIQVYHSDDS
ELSMRFGEMA WIQRLHVALE ENRFCLYAQE IAALTALEGQ GHVEILLRLQ DESGRTILPD
SFIPAAERYG LMTAIDRWVV RNVFQVIRQC LDEGREGPLS MCAINLSGSS IGDDKFLEYL
QRLFVEYSIP PRLICFEITE TSAIANLGSA IRFINELKGL GCKFSLDDFC AGMSSFAYLK
HLPVDFLKID GSFVKDMLDD PVNRAMVEVI NHIGHVMGKR TIAEFVETPL IEQALQEIGV
DYAQGYLIER PQVFTCDSLQ RQRIAARPLL HRAPGTFR
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