Gene PputW619_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1342 
Symbol 
ID6110270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1464318 
End bp1464659 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content64% 
IMG OID641621116 
Productphage head-tail adaptor 
Protein accessionYP_001748216 
Protein GI170720528 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.280086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCG GCAAGCTCCG GCACCGCATC GACATTCAGG AGCTGAAAGC GGTGCGTGAC 
CCGGTGACCC TGGAGTTCGG GGAGCCAGAA TGGGTCACTC GCTGGGAGAG GTGCCCAGCC
AGGGTCGAAG ACCTGTCGAC CAGAGACTTC ATCTCAGCTC AGGCCGGCCA GGCGCAGGCC
ACAAGTCGGA TGGTTATCCG GTACCGGCCT GGCGTCCTAC CCACAATGCG CATCCGTTAC
CGGGGCGAGG TGTACAGCAT CGTCGGCCCG CCGCTGGCCG ACGCCAAATC CGGCCTCTAC
TACCTGACGA TCTTGGTCGA GAAGGGGGTG AAAGATGGCT GA
 
Protein sequence
MQAGKLRHRI DIQELKAVRD PVTLEFGEPE WVTRWERCPA RVEDLSTRDF ISAQAGQAQA 
TSRMVIRYRP GVLPTMRIRY RGEVYSIVGP PLADAKSGLY YLTILVEKGV KDG