| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1315 |
|---|
| Symbol | |
|---|
| ID | 6110243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1448249 |
|---|
| End bp | 1449019 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641621089 |
|---|
| Product | prophage antirepressor |
|---|
| Protein accession | YP_001748189 |
|---|
| Protein GI | 170720501 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3617] Prophage antirepressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.930298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGA TCCCCTTCAA TTTCAATGGC CATGAAATCC GCGTCGTAAA GGATCATGCC
AATGAACCTT GGTTTGTGGC CAAGGACATT GCTGATGATC TCGGCTATTC GTGGGCTGGC
ACCAGCACTA TCGCCCATGT GCCGGAGCAA TGGCGGGGGG TCAGATCCGT TCTGACCCCC
TCAGGCAACC AGCAAATGGC AGTGCTGAGC GAGCAGGGGC TCTACTTCTT CCTGGGCAGA
TCAGACAAGC CTGGCGCACT TCCTTTGCAA ATGTGGGTGG CGGGGGAGGT AATCCCATCG
ATCCGCAAGA CGGGCAGCTA TCAGCGACCG ATGACACCAG CTGAGCAACT GCTGGCGCAA
GCGCAGACGA TGGTCACGCT CGAGCGCCAG CAGGCCGAGC AGCAAGTGGC GCTGGAGCGC
GTCGAGGACC GCACCACCAA GCTGGAACAG GTGCGCTATC TCGACTCCGT GCCCAGCGGC
TTCGAAACCA TCACCACGAT CCGCGACCGC ATCAATCGCC GTCACGGCCT GCCGGCCTGG
GTGGTGAATG CTGTGATGCG GGAGGTTTCC TGTGCGCCGC TGCCGTACGC CTTTGTCCGC
AGTCGCCACG CTGATGAAGG CGGGCAGCCC TTCGCCATCT GGCCCAAGCC AGCCGTCACC
CAGCGGTTCG ACCGGTTCGT ATCGGAATGC ACCTACGAGA CCGCTGAACG CGCAACCCAT
CCAGAGATCC CGCAGGGACG CTTCAAGATT CATCCGAGAC AGCAGCCATG A
|
|---|
| Protein sequence | MNLIPFNFNG HEIRVVKDHA NEPWFVAKDI ADDLGYSWAG TSTIAHVPEQ WRGVRSVLTP
SGNQQMAVLS EQGLYFFLGR SDKPGALPLQ MWVAGEVIPS IRKTGSYQRP MTPAEQLLAQ
AQTMVTLERQ QAEQQVALER VEDRTTKLEQ VRYLDSVPSG FETITTIRDR INRRHGLPAW
VVNAVMREVS CAPLPYAFVR SRHADEGGQP FAIWPKPAVT QRFDRFVSEC TYETAERATH
PEIPQGRFKI HPRQQP
|
|---|
| |