| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1308 |
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| Symbol | |
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| ID | 6110236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1445251 |
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| End bp | 1445940 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641621082 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001748182 |
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| Protein GI | 170720494 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACA AAGACCGCAT TAAGGCTGCG CGGAAGCACG CACGCCTCAC GCAGGCCGAG
CTGGCCGCTA TGACCGGAAT CAACCAAGCG TCGATTTCAG ACCTTGAGCG CGGGCGATCT
CAGCGCTCTT CATACAACTC GACCATTGCT CGGGCTTGCG GAGTTTCTGC AATCTGGCTT
GAGGCTGGCA TAGGGACCAT GCTCCAGAAT GATGATGTCC CAGGCTTCGA TGCTCCAGGC
TTCGACTCCA ACGTTGCCCC TGCTTTGGCT CCAACCAGGT ACTTCTCGTA CCCAGAGATA
TCGTGGGTAC AGGCAGGGAG CCCAAGTGAA GCAATGAGTG TTGCCAATAT CGCGGCATGT
CCGAGCCATC ACTCGGACGT GTGGGCTGGT GAAAATGGTT TTTGGCTGAA GGTGATCGGA
TCGTCGATGA CCAGTCAGTC AGGTATTTCC TTCCCCGAAG GCGTGCTGAT ACTGGTGGCG
CCGGACATTG AGCCACGACC AGGTCAATAC GTAGTCGCTA GGATGATTGA CTCCAACGAG
GCAACCTTCA AACAGCTTGT ACGAGACGCC GGGGACTTTT ACCTAACACC ACTTAACCCA
GCCTTTCCAG CCAAAAAAAT GGACGACACC TGGGAGATCG TTGGGACCGT CGTGGACGGA
AAAATGCCAA AATCAGCTTT TCTCCTCTAG
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| Protein sequence | MEYKDRIKAA RKHARLTQAE LAAMTGINQA SISDLERGRS QRSSYNSTIA RACGVSAIWL
EAGIGTMLQN DDVPGFDAPG FDSNVAPALA PTRYFSYPEI SWVQAGSPSE AMSVANIAAC
PSHHSDVWAG ENGFWLKVIG SSMTSQSGIS FPEGVLILVA PDIEPRPGQY VVARMIDSNE
ATFKQLVRDA GDFYLTPLNP AFPAKKMDDT WEIVGTVVDG KMPKSAFLL
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