| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1287 |
|---|
| Symbol | |
|---|
| ID | 6110215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1426332 |
|---|
| End bp | 1427156 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641621061 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_001748161 |
|---|
| Protein GI | 170720473 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.616959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAACA AATTCCTCTT CGCCACCGCC CTGCTGTTTG CCGGCAATGC CCTGGCCGCG
GAAACCGCGC CGCGCACCAG CGTGATCGAG TCCGACCCTC AGGTAACCGC CGAACCCTTG
GCCCCCGAAG CCGACGGCTT CATCGACCCG CTGCGCGAAC TGAAATTCAA CCCAGGCCTG
GACCAGCGCG AATTCGAGCG CTCCACCCTG GCGGCGCTCA ACATATACGA CCCGCTGGAG
TCGCTGAACC GGCGCATCTA CCACTTCAAT TACCGCCTGG ACCAGTGGGT GCTGCTGCCG
CTGGTGGATG GCTACCAGTA CGTCACACCC AGGTTCGTGC GCACCGGGGT GAGCAATTTC
TTCAATAACC TGGGCGATGT GCCGAACCTG TTCAACAGCG TGCTGCAGCT AAAGGCAAAG
CGTTCGGCAG AGATCACCGC ACGGCTGATG TTCAATACCA TCATCGGTGT GGGTGGGCTA
TGGGACCCGG CGACCAAGAT GGGCCTGCCG CGCCAGAGCG AGGATTTTGG CCAGACATTG
GGGTTCTATG GCGTGCCTGA TGGGCCGTAC ATCATGCTGC CGGTACTGGG GCCATCCAAC
TTGCGCGATA CCACCGGGGT GGTGGTGGAT TACGCCGGCG AACAGGCGAT CAATTACCTG
AATATGGCCG AGGTCAGCAC CGATCATCCG GAAATTTTCC TGCTGCGCGC GGTGGACAAG
CGCTACACCA CCAAATTCCG CTACGGCCAG CTCAACTCGC CGTTCGAGTA CGAGAAGGTT
CGGTATGTGT ATACCCAGTC GCGCAAGTTG CAGATTGCCG AATAA
|
|---|
| Protein sequence | MVNKFLFATA LLFAGNALAA ETAPRTSVIE SDPQVTAEPL APEADGFIDP LRELKFNPGL
DQREFERSTL AALNIYDPLE SLNRRIYHFN YRLDQWVLLP LVDGYQYVTP RFVRTGVSNF
FNNLGDVPNL FNSVLQLKAK RSAEITARLM FNTIIGVGGL WDPATKMGLP RQSEDFGQTL
GFYGVPDGPY IMLPVLGPSN LRDTTGVVVD YAGEQAINYL NMAEVSTDHP EIFLLRAVDK
RYTTKFRYGQ LNSPFEYEKV RYVYTQSRKL QIAE
|
|---|
| |