| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1281 |
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| Symbol | |
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| ID | 6110209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1421219 |
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| End bp | 1421854 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621055 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001748155 |
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| Protein GI | 170720467 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.147193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGT CGAACGTCCA GATCCTTCAT GAAGACGCCG CCATCCTGGT GGTCAACAAG
CCGACCCTGC TGCTGTCGGT GCCAGGCCGC GCCGATGACA ACAAGGACTG CCTGATCACC
CGCCTGCAGG AAAACGGCTA CCCGGATGCG CTGATCGTCC ACCGCCTGGA CTGGGAAACC
TCCGGCATCA TCCTGCTGGC CCGCGATGCC GACAGCCACC GCGAGCTGTC GCGCCAGTTC
CACGACCGCG AGACCGAGAA GGCCTACACC GCCCTGTGCT GGGGCCAGCC GGCGCTGGAC
AGCGGCAGCA TCGACCTGCC CCTGCGCTAT GACCCGCCCA CCAAGCCACG CCATGTGGTG
GACCACGAGC AAGGCAAACA CGCCCTGACC TTCTGGCGCA TCCTCGAGCG TTGCGGCGAC
CACTGCCGGG TTGAGTTGAC GCCGATCACC GGCCGTTCGC ACCAGTTGCG CGTGCACATG
CTGTCGATCG GGCACCCGCT GCTCGGTGAC CGTTTGTATG CCAACCCCGA GGCACTGGCG
GCACATGAGC GGTTGTGCCT GCATGCGGCA ATGTTGAGCT TCACCCACCC GGTTTCCGGG
GAGCGGCTGA AGTTCGAGTG CCCTGCACCT TTTTAA
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| Protein sequence | MPLSNVQILH EDAAILVVNK PTLLLSVPGR ADDNKDCLIT RLQENGYPDA LIVHRLDWET
SGIILLARDA DSHRELSRQF HDRETEKAYT ALCWGQPALD SGSIDLPLRY DPPTKPRHVV
DHEQGKHALT FWRILERCGD HCRVELTPIT GRSHQLRVHM LSIGHPLLGD RLYANPEALA
AHERLCLHAA MLSFTHPVSG ERLKFECPAP F
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