| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1277 |
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| Symbol | |
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| ID | 6110205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1415959 |
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| End bp | 1418115 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621051 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001748151 |
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| Protein GI | 170720463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.44534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGCCC TCCTGCGTTG CCTTGCCCTG CTGCTGTTTC TGTTCATCTC CCCGGTACAA
GCCGCCGGCC TGCCTGGCCT GCTTGGCTCC AGTGCGCCGG CCCAGCCAGA AGCCACCGAG
CCCTTGGGCA AATCGCTGGA CGAGGTGATC AAGAACCTGG AGAACGACCA GCAACGCGCC
AAGCTGCTGG CCGACCTGAA AAAGCTGCGT GACGCCACCA AGCAGTCGCA ACCTACCGCC
GAACAGGGCG TGCTGGGCCT GATCGGCGGT GCGCTGCATG ATTTCGAGAA GCAGTTCAGC
GGCGACGCCA GCCCGTTCCA GCGGTGGGCG CTGGAAATCG ACCAGGCCCA GGCGGAGCTG
GCTGAACTGG TGGTGCCCGT GCACCAGTGG CCGGCGATCC TGTTCGGCTT TGCCGCGATC
ATCGCCGTGT GGAGCCTGCT GGCCTATGCA TTCAACTGGA TCGGCCACCG GGTGCGTGTG
CGCTTCGGCC TGACAGAGGA GTTGCCGCAG CACCCGCGCA CCTGGGACCT GGTGCGCTTC
GCCCTGCGCA AGCTGGGGCC GTGGCTGGTG GCGCTGGTGT TCACGGTGTA CCTGAGCTTT
GCCCTGCCCT CCTCGCTCGG CAAGTCCATG GCCATGGTGT TGGCCTATGC GCTGGTGGTG
GGCACCTGCT TCTCAGCCAT CTGCGTGATC GCCTTCTCGC TGCTCGACGG CCCGCACCGC
CACCGCGCGC TGCACATCCT GCGCCACCAG GCATTTCGGC CGCTGTGGCT GATCGGCAGC
TTCGCCGCCT TTGGCGAAGC GATGAGCGAC CCGCGCCTGA CCGTCGCCCT TGGTACACAC
CTGGCGCACG CCCTGGCCAC CCTGGCCAAT GTGATTGCCG CGCTGTGCAC CGGGCTGTTC
ATCCTGCGTT TCCGCCGCCC GATCGCCCAC CTGATCCGCA ACCAGCCCCT GTCGCGGCGC
CTGACCCGGC GCACCCTGAG CGACACCATC GAAATCCTCG GCAGCTTCTG GTACATACCG
GCGATGATCC TGGTGGCGAT CTCGCTGTTC GCCACTTTCG TGTCGGCCGG CGACACCAGC
ACCGCGCTGC GCCAGTCACT GATGTGCACG GTGCTGGTGG TGGTGTGCAT GGTGCTCAAT
GGCCTGGTGC GCCGCCACGC CGCCAACCCC AAGCGCGCCA ACAAGCGGCA GGCGGTATAC
ACAGAGCGCC TGCGCAACTT CGGTTATGTG CTGGTGCACC TGTTCATCTG GCTGGTGTTC
ATCGAACTGG GGCTGCGCGT TTGGGGCCAG TCGATGATCA GCTTCGCCGA AGGTGAGGGC
CATGAAGTCA GCCTGCGCCT GCTGGGCCTG GCCGGCACGC TGATTGTCGC CTGGCTGGTG
TGGATACTGG CCGACACGGC CGTGCACCAC GCACTGGTGC GTTCACGCCG GGGCCTTGCC
AATGCCCGGG CGCAAACCAT GATGCCGCTG ATCCGCAACG TGATGTTCGT GGTGATCTTC
ATCATTGCGC TGATCGTCGC CCTGGCCAAC ATGGGCATGA ACGTCACGCC GCTGCTGGCC
GGTGCCGGTG TGATCGGCCT GGCCATCGGT TTTGGCGCGC AGTCGCTGGT GGCCGACCTG
ATCACGGGCC TGTTCATCAT CATCGAAGAC TCCCTGGCCA TCGACGACTA TGTCGATGTG
GGCGGCCACC TGGGCACCGT CGAAGGCCTG ACCATCCGCA CCGTGCGCCT GCGCGACATC
GATGGCATCG TGCATACCAT CCCGTTCAGC GAGATCAAGA GCATCAAGAA CTACTCGCGC
GAGTTCGGCT ATGCGATCTT CCGTGTTGCC ATCCCGCACA GCATGAACAT CGACCAGGCC
ATCACGCTGA TCCGCGAAGT GGGACAGAAA CTGCGCAACG ATCCACTGAT GCGCCGCAAT
ATCTGGTCAC CCCTTGAGCT GCAAGGGGTG GAAAGTTTCG AGTCTGGTTC GGCGATTCTG
CGGGCGCGCT TCAAGACCGC ACCCATCAAG CAATGGGAAG TGTCGCGGGC GTTCAACCTG
GCTTTGAAGC GCCAACTGGA TGCAGCAGGG CTGGACCTGG CGACGCCACG CTTGTCGGTG
CAGGTGGTGA CGGCGGGCGG CGGCGCGATG GCAGAAGCCG GCGGGACTGC CGATTAG
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| Protein sequence | MPALLRCLAL LLFLFISPVQ AAGLPGLLGS SAPAQPEATE PLGKSLDEVI KNLENDQQRA
KLLADLKKLR DATKQSQPTA EQGVLGLIGG ALHDFEKQFS GDASPFQRWA LEIDQAQAEL
AELVVPVHQW PAILFGFAAI IAVWSLLAYA FNWIGHRVRV RFGLTEELPQ HPRTWDLVRF
ALRKLGPWLV ALVFTVYLSF ALPSSLGKSM AMVLAYALVV GTCFSAICVI AFSLLDGPHR
HRALHILRHQ AFRPLWLIGS FAAFGEAMSD PRLTVALGTH LAHALATLAN VIAALCTGLF
ILRFRRPIAH LIRNQPLSRR LTRRTLSDTI EILGSFWYIP AMILVAISLF ATFVSAGDTS
TALRQSLMCT VLVVVCMVLN GLVRRHAANP KRANKRQAVY TERLRNFGYV LVHLFIWLVF
IELGLRVWGQ SMISFAEGEG HEVSLRLLGL AGTLIVAWLV WILADTAVHH ALVRSRRGLA
NARAQTMMPL IRNVMFVVIF IIALIVALAN MGMNVTPLLA GAGVIGLAIG FGAQSLVADL
ITGLFIIIED SLAIDDYVDV GGHLGTVEGL TIRTVRLRDI DGIVHTIPFS EIKSIKNYSR
EFGYAIFRVA IPHSMNIDQA ITLIREVGQK LRNDPLMRRN IWSPLELQGV ESFESGSAIL
RARFKTAPIK QWEVSRAFNL ALKRQLDAAG LDLATPRLSV QVVTAGGGAM AEAGGTAD
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