| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1271 |
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| Symbol | |
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| ID | 6110199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1410272 |
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| End bp | 1411261 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621045 |
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| Product | ABC transporter related |
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| Protein accession | YP_001748145 |
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| Protein GI | 170720457 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0543066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG TCAGCGTACA GAAACTGCAC AAACGCTATG CCGGCACCCC CGTGTTCGAA
AATATCGACT GCCAGATCGA GCGCGGCGAA TTCGTCACCT TGCTCGGCCC TTCCGGCTGC
GGCAAGTCCA CCCTGCTGCG CTGCATCGCC GGGCTGACCC CGGTGGACGG CGGGCAGATT
CTGCTCGACG GCCAGGACAT CGTGCCGCTG AGCCCGCAAA AGCGCGGCAT CGGCATGGTG
TTCCAGAGCT ATGCGCTGTT CCCCAACATG ACAGTGGAGC AGAATGTCGC CTTTGGCCTG
CGCATGCAGA AGGTCAAGGC CAGTGACATT CAAGTACGCG TGCGCGAGGC GCTGGAACTG
GTGGAACTGG GCAGTTTTGC CGGGCGCTAC CCGCACCAGC TGTCCGGCGG CCAGTGCCAG
CGTGTGGCCC TGGCCCGCTC GCTGGTCACC CGCCCGCGCC TGCTGCTGCT CGACGAGCCG
CTGTCGGCGC TGGATGCGCG TATTCGCAAG CACCTGCGCG AGCAGATCCG CGCCATCCAG
CGCGAACTGG GGCTGACCAC CATCTTCGTT ACCCATGACC AGGAAGAGGC GCTGACGATG
TCTGATCGCA TCTTCCTGAT GAACCAGGGG CGCATCGTGC AGAGCGGCGA CGCCGAAACC
CTGTACACGG CCCCGGTGGA CCTGTTTGCC GCCGGTTTCA TCGGCAACTA CAACCTGCTC
GACCCGGACA GTGCCAGCCG CCTGCTGCAA CGCCCGGTGG CCAACCGCCT GGCGATTCGC
CCCGAGTCGA TCACCTTGAG CCGCAATGGC GAACTGGACG GGGAAGTGCG CAGTCACAGC
CTGCTCGGCA ATGTGATCCG CTACCGGGTA CGGGTACGTG AAGTGGAGCT GGTGGTGGAT
GTGCTCAATC GCTCATCGGC CGACCTGCAC GCGGACGGCC AGCGGGTATC CTTGTCGATC
GACCCCACGG CGCTACGGGA AGTGGCCTAA
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| Protein sequence | MSFVSVQKLH KRYAGTPVFE NIDCQIERGE FVTLLGPSGC GKSTLLRCIA GLTPVDGGQI
LLDGQDIVPL SPQKRGIGMV FQSYALFPNM TVEQNVAFGL RMQKVKASDI QVRVREALEL
VELGSFAGRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK HLREQIRAIQ
RELGLTTIFV THDQEEALTM SDRIFLMNQG RIVQSGDAET LYTAPVDLFA AGFIGNYNLL
DPDSASRLLQ RPVANRLAIR PESITLSRNG ELDGEVRSHS LLGNVIRYRV RVREVELVVD
VLNRSSADLH ADGQRVSLSI DPTALREVA
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