| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1262 |
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| Symbol | |
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| ID | 6110190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1401220 |
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| End bp | 1402152 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621036 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001748136 |
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| Protein GI | 170720448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0948373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0721838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTCG ACACCCGCAT CAAGTACCGC CACCTGCTGT GCTTCCTGGA GATTGCCCGG
CAGGGCAGCC TGGCCAGGGC CGCCGACATT CTGGCGATCA GCCAGCCGGC AATTTCCAAA
ACCCTCAAGG AGCTTGAAGA CCTGCTCGAG ACGCGCTTGT TCGAGCGCAG CCGCCAGGGC
GTCGAGCTGA CCCCGGCCGG AACTCGCTTC ATGCATTACG CCGGGCCCAG CGTACAGGCC
CTGCGCGACG GCGTGAGCAG CTTGCGCGGT GAAGCGCGCG CACCGTCGCA GGTGCGCATC
GGCGTGCTGT CCACCGTCGA AGGCCTGCTG ATGCCCGAGG TGCTGTGCCG CCTGCATCAA
CGCCATGAGG CGTTGTTGAT CAGCGTGGTG ACCGGCGCCA GTGCACAGTT GCTCGGGCAG
TTGCGCCTGG GCGAACTGGA ACTGGTGGTC GGGCGCATGA CCGATAGCCC GCAGATCCAG
GGTTTGTCGT TCGAACATCT GTACAGCGAG TCGATGGCTT TGGTCGTGCG CCCAGGTCAC
CCATTGCTGG CCAACATGCA AGTAGACCGA GCCCGCGTTG GCCGTTATCC ACTGGTGCTC
CCACCACCGG GCACTACCAT TCGCCAGCAC GCCGACAGCC TGTTCGTGCA ATGCGGCATT
CAACTGCCGG CACAGCGCCT TGAGACCCTT TCACTGGCCT TGAGCCGGCG CTACCTGCTG
GGCAGTGATG CCGTGTGGGT GGCGCCGCGT GATGCGGTGC TGCTTGACCT GCGTCGCGGC
GAACTTGCCG AGCTTGATCT GGGGGTGCGG GAACCGGGCG GGTCTGTGGG CATCTGCCGC
AATGCCGCGT TGGCGCTGAG CCTGCCGGGG CAGTGGGTGT GCGATGTGTT GCGGGAAGTG
GCGGGGCAAT ATCGCGAGCG GTTGTACCCG TAA
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| Protein sequence | MNLDTRIKYR HLLCFLEIAR QGSLARAADI LAISQPAISK TLKELEDLLE TRLFERSRQG
VELTPAGTRF MHYAGPSVQA LRDGVSSLRG EARAPSQVRI GVLSTVEGLL MPEVLCRLHQ
RHEALLISVV TGASAQLLGQ LRLGELELVV GRMTDSPQIQ GLSFEHLYSE SMALVVRPGH
PLLANMQVDR ARVGRYPLVL PPPGTTIRQH ADSLFVQCGI QLPAQRLETL SLALSRRYLL
GSDAVWVAPR DAVLLDLRRG ELAELDLGVR EPGGSVGICR NAALALSLPG QWVCDVLREV
AGQYRERLYP
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