| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1257 |
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| Symbol | rdgC |
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| ID | 6110181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1390946 |
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| End bp | 1391902 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621027 |
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| Product | recombination associated protein |
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| Protein accession | YP_001748131 |
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| Protein GI | 170720443 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00452167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCCCT TATGCATTAA GGAGAGACTA ACCCTCATGT GGTTCAAGAA CCTGCTGACC
TACCGCCTGA CCCAGGATGT CCCGTTCGAG GCTGAAGCAC TGGAGGCCGC CCTGGCCAGC
AAGCCGGCCC GCCCCTGCGC CAGCCAGGAG CTGACCACTT ATGGTTTCGT CGCGCCGTTC
GGCAAAGGCG AAGACGCTCC CCTGGTGCAC GTCAGCGGCG AGTTCCTGCT GATTGCCGCG
CGCAAGGAAG AACGCATCCT GCCAAGCAGC GTCGTAAACG ATGCTGTCAA AGAGAAGGTC
GAAGAGATCG AGACCGAGCA GATGCGCAAG GTCTATAAAA AGGAACGCGA CCAGATCAAG
GACGAGATCA TCCAGGCCTT CTTGCCACGC GCGTTCATCC GCCGCTCGAT GATCTTTGCC
GCCATCGCCC CGCGCCTGGG CATGATCCTG GTCAACTCGG CCAGCGCCAA GCGCGCCGAA
GACCTGCTGT CGACCCTGCG TGAGGTGATG GGCTCGCTGC CGGTGCGCCC TGCCACGGTG
AAGATCGCGC CGACCGCGAC CATGACCGAC TGGGTCAAGT CGCAACAGGC TGCCGAAGGT
TTCTATGTGC TGGATGAGTG CGAGTTGCGC GACACCGCTG AAGATGGCGG TATCGTGCGT
TGCAAACGCC AGGATCTGAC CGGCGAGGAA ATCCAGCTGC ACCTGAGCAC CGGCAAAGTG
GTTACCCAAC TGGCCCTGGC CTGGCAGGAC AAGCTGTCTT TCGTGCTCGA CGACAAGATG
GTGATCAAGC GCCTGAAGTT CGAGGAGTTG CTGCAGGAGC AGGCCGAACA GGATGGCGGC
GATGAAGCGG CGCAGCAGTT CGATGCCAGC TTCCTGCTGA TGATGATGAC CTTCAGCGAA
TTCCTGCCGG TGCTGTTCGA AGCGCTGGGC GGCGAAGAGA TTCCGCAAGG GGTCTGA
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| Protein sequence | MPPLCIKERL TLMWFKNLLT YRLTQDVPFE AEALEAALAS KPARPCASQE LTTYGFVAPF
GKGEDAPLVH VSGEFLLIAA RKEERILPSS VVNDAVKEKV EEIETEQMRK VYKKERDQIK
DEIIQAFLPR AFIRRSMIFA AIAPRLGMIL VNSASAKRAE DLLSTLREVM GSLPVRPATV
KIAPTATMTD WVKSQQAAEG FYVLDECELR DTAEDGGIVR CKRQDLTGEE IQLHLSTGKV
VTQLALAWQD KLSFVLDDKM VIKRLKFEEL LQEQAEQDGG DEAAQQFDAS FLLMMMTFSE
FLPVLFEALG GEEIPQGV
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