| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1250 |
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| Symbol | |
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| ID | 6110174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1379611 |
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| End bp | 1383087 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621020 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001748124 |
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| Protein GI | 170720436 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0252543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGT CCAGCGGGCT GATCGCCCTG GTCGCCCTGG CCTACATGGC CGTCATGTTC
GCCATCGCCT TCTACGGCGA CCGCCGCAGC ACACCATTGC CGCCTCGGCT GCGCGCCTGG
GTGTATAGCC TGTCACTGGC GGTGTACTGC ACCAGCTGGA CTTTCTTCGG TGCGGTCGGC
CAGGCGGCCG AGCAACTTTG GGCGTTCCTG CCGATCTACC TGGGCCCGAT CCTGCTGCTG
ATCTTCGCAC CCTGGGTGCT GCAGAAGATG GTGCTGATCA GCAAGCAGCA GAACATCACC
TCGATCGCCG ACTTCATCGC TGCGCGCTAC GGCAAGTCGC AGACCCTGGC CGTAGTGGTG
GCGCTGATCT GCCTGGTCGG GGTGCTGCCC TACATCGCTT TGCAGCTCAA AGGCATCGTG
CTCGGTGTCA ACCTGCTGAT CGGCGCGAAT GCCGACGCCA CCGGCACCCG CGTACAGGAC
ACCGCGCTGG TGGTGTCGCT GGTACTGGCG CTGTTCGCCA TCGTCTTTGG CACGCGCAGC
CTCGACGTGA CCGAACACCA CCGCGGCATG GTCCTTGCCA TCGCGTTCGA GTCGCTGATC
AAGTTGCTGG CCTTCCTCGC CGTCGGCGTG TTCGTGGTGT TCAACCTTTA CGACGGGTTT
GACGACCTGT TCACCCAGGC ACGCCAGTCG GTGCTGCTGG ACAGCTACTG GCAGGAGACG
ATCAACTGGC CATCGATGGT GGTGCAGACC GCCGTGGCGA TGATGGCGAT CATCTGCCTG
CCCCGGCAGT TCCACGTGAC CGTGGTGGAG AACATCGAGC CACAGGACAT GCGCCTGGCG
CGCTGGGTGT TCCCGATGTA CCTGGCCCTG GCCGCGCTGT TCGTGGTGCC CATTGCCTTG
GCCGGGCAAA TGCTGCTGCC AGGTGCGGTG ATTTCCGACT CCTTCGTGAT CAGCCTGCCG
TTGGCCGAAG CGCACCCGAG CCTGGCCTTG CTGGCCTTCA TCGGCGGTGC CTCAGCCGCC
ACCGGCATGG TCATCGTCGA GGCCGTGGCG TTGTCGACCA TGGTTTCCAA TGACATGCTG
CTGCCGTGGC TGTTGCGCCG CAATAACGCC GAGCGGCCCT TCGAGGTATT CCGCCACTGG
ATGCTGTCGG TGCGCCGGGT GACCATCGTG GTCATCCTGC TGCTGGCCTA TGTCAGCTAT
CGCCTGCTTG GCTCTACCGC GAGCCTTGCA ACCATCGGCC AGATTGCCTT CGCCGCCGTG
ACTCAACTCA CTCCAGCCAT GCTCGGTGCG CTGTACTGGA AGCAAGCCAA CCGCCGTGGC
GTGTTCGCCG GCCTCGCAGC GGGTATCTTC CTGTGGTTCT ACACCCTGGT GCTGCCGATC
GCCGCCCACA GCCTGGGCTG GTCGCTGCAG CTGTTCCCGG GCCTGGCGTG GCTGCACGGC
AACCCGCTGG GCCTGCCGAT CACGCCGCTC ACACAGGGGG TGGTGCTGTC ACTGGCGGGC
AACTTCACCT TGTTCGCCTG GGTCTCGATG CTGTCACGCA CGCGCGTGTC GGAACACTGG
CAGGCCGGGC GCTTCATCGG CCAGCAGACC AGTGCCCGCC CCAACGGCAA ACCGCTGCTG
GCGGTGCAAA TCGATGACCT GCTGACGCTG GCCTCACGCT TTGTCGGTGA GGAACGTGCC
CGGCAAAGCT TCATCCGCTT TGCCTATCGC CAGGGCAAAG GCTTCAACCC CAACCAGAAC
GCTGACGGCG ACTGGATCGA ACACACCGAG CGCCTGCTCG CCGGGGTGCT CGGCAGCTCC
TCGACCCGCG CAGTGGTCAA AGCGGCCATC GAAGGCCGCG ACATGCAGCT TGAAGACGTC
GTGCGAATCG CCGACGAAGC CAGCGAAGTG CTGCAGTTCA ACCGCGCGCT GCTACAAGGC
GCCATCGAGA ACATCAACCA GGGCATCAGT GTGGTCGACC AGAACCTGCA TCTGGTGGCC
TGGAACCGCC GCTACCTGGA GCTGTTCAAC TACCCCGACG GATTGATCAG CGTGGGCCGG
CCGATCGCCG ACATCATCCG CTACAACGCT GAACGCGGCC TGTGCGGCCC TGGCGAGGCA
CAGGTGCATG TGGCGCGGCG CCTGCACTGG ATGCGCCAAG GCCGTGCGCA TTCGTCCGAG
CGGCTGTTCC CCAATGGCCG GGTGATTGAG CTGATCGGCA ACCCGATGCC CGGGGGCGGT
TTTGTCATGA GCTTCACCGA CATCACCCCG TTCCGCGAGG CCGAACAGGC GTTGCGCGAT
GCCAACGAGC GCCTTGAACA ACGGGTGGCC GAACGCACCC ACGAGCTGTC GCAACTGAAC
CAGGCCCTGT CGGAGGCCAA AAGCCAGGCC GAAGCGGTCA GCAAGTCCAA GACCCGCTTC
CTGGCAGCGG TCAGCCATGA CCTGATGCAA CCGCTCAACG CCGCGCGGCT GTTCTCCGCC
GCCTTGTCGC AGCAGGCCGA GGGCATGAAC GACGAGGCCC AACAGTTGGT GCAGCACATG
GACAGCTCGC TGCGCTCGGC CGAAGAGCTG ATCAGCGACC TGCTGGATAT CTCGCGCCTG
GAAAACGGCA AGATCACCCC GGACACCAAG CCGTTTGCCC TGAACGAGCT GTTCGATACG
CTGGGTGCCG AGTTCAAGGT CCTGGCCGCC GAGAAGGGGC TGGAGTTCCG CCTGCGCGGT
AGCCGCCTGC GCATCGACAG TGACATGAAA CTGTTGCGCA GGGTGCTGCA GAACTTCCTT
ACCAATGCGC TGCGTTACGG CAAGAGCCCG ATCCTGCTGG GCGCCCGGCG CCAGGGCGAA
CAGCTGTGGC TGGAAGTCTG GGACCGCGGC CCGGGCATCG CCGACGACAA GCTGCAGGTC
ATCTTCCAGG AATTCAAGCG CCTGGACAGC CACCAGACCC GCGCCGAAAA GGGCCTGGGG
CTGGGCCTGG CGATTGCCGA TGGCCTGTGC CGGGTGCTCG GCCACACGCT GCAGGTGCGC
TCATGGCCCG GCAAAGGCAC CGTGTTCCGC GTCAACGTAC CGATCGCCCG CCAGGCGGTA
ACCGCGCCGA GCGCGCCGGT GGAGCAAGTC AGCCAGCCCC TGGCCGGGCT ACAGGTACTG
TGCATCGACA ACGAAGACAG CATCCTGATC GGCATGAACA GCCTGCTCAG CCGTTGGGGC
TGCCAGGTGT GGACAGCGCG CAACCGCGCC GACTGCGAGG CATTGCTGGC GCAGGGCATG
CGCCCGCATC TGGCGCTGGT GGACTATCAC CTGGATGACG GCGAAACCGG AACCGGGCTG
ATGGGCTGGC TACGCGCCCG CCTGGGCGAG CCGGTGCCTG GGGTGGTGAT CAGCGCCGAC
GGCAGCAAGG AAACCTTGGC CACGGTTCAT GCCGCCGGCC TCGATTACCT GGCCAAGCCG
GTCAAGCCCG CGGCCTTGCG CGCACTGCTC AATCGCCATC TGAGCCTGGT TCAGTAA
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| Protein sequence | MSLSSGLIAL VALAYMAVMF AIAFYGDRRS TPLPPRLRAW VYSLSLAVYC TSWTFFGAVG
QAAEQLWAFL PIYLGPILLL IFAPWVLQKM VLISKQQNIT SIADFIAARY GKSQTLAVVV
ALICLVGVLP YIALQLKGIV LGVNLLIGAN ADATGTRVQD TALVVSLVLA LFAIVFGTRS
LDVTEHHRGM VLAIAFESLI KLLAFLAVGV FVVFNLYDGF DDLFTQARQS VLLDSYWQET
INWPSMVVQT AVAMMAIICL PRQFHVTVVE NIEPQDMRLA RWVFPMYLAL AALFVVPIAL
AGQMLLPGAV ISDSFVISLP LAEAHPSLAL LAFIGGASAA TGMVIVEAVA LSTMVSNDML
LPWLLRRNNA ERPFEVFRHW MLSVRRVTIV VILLLAYVSY RLLGSTASLA TIGQIAFAAV
TQLTPAMLGA LYWKQANRRG VFAGLAAGIF LWFYTLVLPI AAHSLGWSLQ LFPGLAWLHG
NPLGLPITPL TQGVVLSLAG NFTLFAWVSM LSRTRVSEHW QAGRFIGQQT SARPNGKPLL
AVQIDDLLTL ASRFVGEERA RQSFIRFAYR QGKGFNPNQN ADGDWIEHTE RLLAGVLGSS
STRAVVKAAI EGRDMQLEDV VRIADEASEV LQFNRALLQG AIENINQGIS VVDQNLHLVA
WNRRYLELFN YPDGLISVGR PIADIIRYNA ERGLCGPGEA QVHVARRLHW MRQGRAHSSE
RLFPNGRVIE LIGNPMPGGG FVMSFTDITP FREAEQALRD ANERLEQRVA ERTHELSQLN
QALSEAKSQA EAVSKSKTRF LAAVSHDLMQ PLNAARLFSA ALSQQAEGMN DEAQQLVQHM
DSSLRSAEEL ISDLLDISRL ENGKITPDTK PFALNELFDT LGAEFKVLAA EKGLEFRLRG
SRLRIDSDMK LLRRVLQNFL TNALRYGKSP ILLGARRQGE QLWLEVWDRG PGIADDKLQV
IFQEFKRLDS HQTRAEKGLG LGLAIADGLC RVLGHTLQVR SWPGKGTVFR VNVPIARQAV
TAPSAPVEQV SQPLAGLQVL CIDNEDSILI GMNSLLSRWG CQVWTARNRA DCEALLAQGM
RPHLALVDYH LDDGETGTGL MGWLRARLGE PVPGVVISAD GSKETLATVH AAGLDYLAKP
VKPAALRALL NRHLSLVQ
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