| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1245 |
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| Symbol | |
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| ID | 6110169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1374431 |
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| End bp | 1375696 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621015 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001748119 |
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| Protein GI | 170720431 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0947409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.253916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TAATGCTCAA AACCTCCCTC GGCTTGGCCG TGGCTTTCGC TTCCAGCCAT
CTGTTCGCTG CCGGCTTTGC CCTCAATGAA CAGAGCATCA GCAGCATGGG GACAGGTTTC
GCGGGACGTT CTTCTTCTGC CGAAGATGCC AGTACCGTGT TTGGCAACCC GGCAGGCATG
TCACGCCTCA AGCGCGAACA GTTCACCGTG GGCGGCGCAG CCGTCATCGC CAAAACCGAT
ATCTCGGGCC CTGGAAGCAA CCTCGGGGGG GAAACCGATG GTGACATGGT GCCTGTAGTC
GGCGTGCCGA TGGGTTACTA CGTCAAACCC ATCGATGATC ACTGGAGCGT CGGTTTCGGC
GTTTATGTAC CGTTTGGCCT GGTAACCGAC TACGGTAGCG ACGATGCCGC GCGCTACTGG
GGTAAAAAGA GCCACGTCGA AGTCGTCACC TTCCAGCCCA CCGTCAGCTA CGCCTTCAAC
GATAAAGTTT CGATCGGTTT CGGCCCGACC ATCAACCGCA TCAAGGGCGA ACTGGGCTCG
AGCCTGATCA ACCCGTTCAC CCCGGGCAGC AATGACGGTG AAGTGAAGAT CAAGGGCGAC
GATACCGCCA TCGGTTACAA CATCGGTATC CTGGTGCAAG CCACAGACCG CACCCGCGTA
GGCCTGACCT ACCACTCCAT GGTCGACTAC AAGCTCGAAG GCAAGACCCG TGTCAGCACA
CCATTGATCG GCCCCTTCAA CGGCGACAAG TTCGACGCCA GCCTTAAGAT CAAGACACCG
GAATCGGTCG ACCTTTCGGT CACCCATGAG CTCGACGACC AATGGACCCT CTACGCGGGC
AGCACCTGGA CCCGCTGGAG CCGCCTGGAA GACATCACCG TGCAGAACGA TGTTCCGGCA
CCGCTGGCAG GTTCGGCGTT CGAGACCATC AGCGAAGAGC AGAACTGGCA TGACACCTGG
GCCCACGCCA TTGGCGCGTC CTACAAGGTG AACAAGGAGT GGGTGCTGCG CACCGGCTTT
ACCGTCGACC AGTCGCCAAC CAACAACCAC GACCGTTCAC CACGCATCCC GACCGGCGAT
CGCAAGGTGT TCAGCCTGGG TGCGGGCTGG AGCCCGAACG ACGACATGAC CATCGACGTG
GCCTACTCCT ACCTGTGGGA GGAAGACACC AAGGTCAACC AGGTCAGCGC CAGCAAAGGC
AGCTACCAGG CCAAGTACGA GAACAGCGCT CACGGTGTGG GTGCCTCCCT CACCTACCGC
TTCTGA
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| Protein sequence | MKKVMLKTSL GLAVAFASSH LFAAGFALNE QSISSMGTGF AGRSSSAEDA STVFGNPAGM
SRLKREQFTV GGAAVIAKTD ISGPGSNLGG ETDGDMVPVV GVPMGYYVKP IDDHWSVGFG
VYVPFGLVTD YGSDDAARYW GKKSHVEVVT FQPTVSYAFN DKVSIGFGPT INRIKGELGS
SLINPFTPGS NDGEVKIKGD DTAIGYNIGI LVQATDRTRV GLTYHSMVDY KLEGKTRVST
PLIGPFNGDK FDASLKIKTP ESVDLSVTHE LDDQWTLYAG STWTRWSRLE DITVQNDVPA
PLAGSAFETI SEEQNWHDTW AHAIGASYKV NKEWVLRTGF TVDQSPTNNH DRSPRIPTGD
RKVFSLGAGW SPNDDMTIDV AYSYLWEEDT KVNQVSASKG SYQAKYENSA HGVGASLTYR
F
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