| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1230 |
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| Symbol | |
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| ID | 6110154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1361510 |
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| End bp | 1362568 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621000 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001748104 |
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| Protein GI | 170720416 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.312733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT ACAAGATTGC GGCAATTGCG GGTGATGGCA TCGGCGTCGA GGTCATCGCG
GCGGGGGTCG AGGTGCTACA GGCGCTTGCT GCCAAACGGG GTAATTTCGC CATTGATTTC
GAGCATTTCG ATTGGGGCTC GGAACGCTAC TTGCGTGAAG GTCAGTACAT TCCAGAAGAC
GGGCTGGAGC AACTCAAGCG CTTCGACGCG ATTTTCTTCG GTGCCGTGGG CAGCCAGGCT
GTGCCGGACC ATGTGTCACT GTGGGGCCTG CGCCTGCCGA TCTGCCAAGG CTTCGATCAG
TATGCCAATG TGCGCCCCGC CCGCGTGCTG CCAGGGGTGA GCAGCCCATT GGCCAAGGGT
AAGGCTATCG ACTGGGTGAT CGTGCGCGAG AACTCCGAAG GGGAATACTC CGGCAGTGGC
GGTCGTGTCC ATCAAGGCCT GCCGATCGAA GTAGCGACCG AGGTCTCGAC GTTCACGCGT
GTCGGTATCG AGCGCATTCA CCGCTTTGCT TTCGATCTGG CCCGCACGCG GCCGGCGAAG
CACCTGACGC TGGTGACCAA GTCCAACGCA CAGCGCCACG GTATGGTGCT GTGGGATGAA
GTGTTCGAAG AGGTGGCCAA GGACTATCCG GATGTGCGCA CCACTCGCGA GCTGGTGGAC
GCTGTGACCA CAACCATGGT CCTCAAGCCG GAGCAACTGG ATGTCGTGGT TGCCACCAAC
CTGCATGCCG ACATTCTTTC GGACCTGGCC GCCGCGTTAT CCGGCAGCCT GGGCATCGCG
CCTACAGCCA ACCTCAACCC GAACCGTGAC TTCCCGTCGA TGTTCGAGCC CATCCACGGT
TCGGCGTTCG ATATCACCGG CAAGGGCGTG GCCAACCCCA TCGCGACCTT CTGGACGGCG
GTCATGATGC TTGAGCACCT CGGTGAGCAG GGCGCCGCTC GTGAACTGAT GGCGGCCATC
GAGGCCGTGA CCGAAAGTGG TGTGCACACC CCGGACCTGG GAGGCAAGGC GACCACTCGC
GAGGTGACCG ATGCGGTGCT GGCGCTGATT CGTCGCTGA
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| Protein sequence | MSSYKIAAIA GDGIGVEVIA AGVEVLQALA AKRGNFAIDF EHFDWGSERY LREGQYIPED
GLEQLKRFDA IFFGAVGSQA VPDHVSLWGL RLPICQGFDQ YANVRPARVL PGVSSPLAKG
KAIDWVIVRE NSEGEYSGSG GRVHQGLPIE VATEVSTFTR VGIERIHRFA FDLARTRPAK
HLTLVTKSNA QRHGMVLWDE VFEEVAKDYP DVRTTRELVD AVTTTMVLKP EQLDVVVATN
LHADILSDLA AALSGSLGIA PTANLNPNRD FPSMFEPIHG SAFDITGKGV ANPIATFWTA
VMMLEHLGEQ GAARELMAAI EAVTESGVHT PDLGGKATTR EVTDAVLALI RR
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