Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1229 |
Symbol | |
ID | 6110153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1360468 |
End bp | 1361385 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620999 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001748103 |
Protein GI | 170720415 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.769515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGA CACAGGACCT GGGCTTCTTC CACCTGTTGG CCAAGCAAGG CAGCCTGGCC GCAACCGCGC GTGAACTGGG CGTTACACCG CCAGCGGTGA GTAAACGTCT GGCTGCGCTG GAGGCACGCC TGGGGGTGCG CCTGGTCAAC CGCACTACCC GCTCGATGAG CCTGACCGCC GAGGGTGAGC TGTACGTTGC CCACGCGGCG CGCATTCTTG CTCAGGTCGA CGAAGTGGAG CAGCTGATCG GCAGGCACCG CGCCGAGCCC AAAGGCTTGA TTCGGGTGAA CGCCTCGCTG GGGTTCGGCC GCCGTTACAT TGGCCCGGCA TTGGCCGACT TCTATGCCCG CTACCCGGAC ATCGAAGTGC AGCTGGAGAT CAGCGACCAC CCGCTGGACC TGGCCAGCCA CGGCTTTGAC CTGGGGATTC GCTTCGGCAC CTTGCCTGAT GCATCCTTTC ATGCCCGCAA GATCGCCTCC AACCGCCGCC TGCTGTGCGC CTCGCCGCTG TACCTGGAGA AGCACGGGGC GCCAACCAAG CTGTCGGACC TGGCCCGGCA CAACTGCATT TTCCTGCGCC AGAACGAGTC GCCCTATGGG GTATGGACCT TCACCAATGG CGGCCGCACC CAGAACATCA AAGTACAGGG CGCACTCAGC TGCAACGACG GTGAAGTAGC ACTGAACTGG GCACTGCAGG GCCATGGCAT CCTGCTGCGC GCCGAGTGGG ACATCGCCCG CTATGTGCGT AGCGGGCGTC TGAGGCTTTT ACTGGAAGAC CAGACCCCCA CCCGCGCCGA CGTCTATGCG GTTTACCCGC AGCAACTGCA CTTGTCGGCA CGGGTAAGGC GCCTGATCGA CTTTCTGATC GAGCGGTTCG AGCGTATCGA CCACCTTGAG CTGGAAGAGG TCAGCTGA
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Protein sequence | MNPTQDLGFF HLLAKQGSLA ATARELGVTP PAVSKRLAAL EARLGVRLVN RTTRSMSLTA EGELYVAHAA RILAQVDEVE QLIGRHRAEP KGLIRVNASL GFGRRYIGPA LADFYARYPD IEVQLEISDH PLDLASHGFD LGIRFGTLPD ASFHARKIAS NRRLLCASPL YLEKHGAPTK LSDLARHNCI FLRQNESPYG VWTFTNGGRT QNIKVQGALS CNDGEVALNW ALQGHGILLR AEWDIARYVR SGRLRLLLED QTPTRADVYA VYPQQLHLSA RVRRLIDFLI ERFERIDHLE LEEVS
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