| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1217 |
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| Symbol | |
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| ID | 6110141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1348978 |
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| End bp | 1351218 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620987 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001748091 |
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| Protein GI | 170720403 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.212214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAGG TGAGAGTGCA CCAGCCGGTC AATACGGACG GCAGTATCAA TCTCGAAGCA
TGGCTGGATC ATGTGGTGAG CGTCGATTCG GCATTGGATC GCGTGGCACT CGAAGAGGCC
TGCGAGTTCG CCCAGGAAAT CGAGAAAAAG GGCAACCCGG CCAAGCATTC CTGGGCCGAT
GGTACCTCCA GTTTCCAGGC AGGCCTGGAA ATCGCCGAAA TCCTTGCCGA CCTCAAGCTC
GATCAGGATT CGCTGGTGGC GGCGGTGATC TACCGCTCCG TGCGTGAGGG TAAGGTGACT
CTGGCCGAGG TCGGGCAGCG TTTCGGCCCG GTGGTGTCCA AGCTGATCGA CGGCGTGCTG
CGCATGGCTG CCATCAGTGC CAGCCTCAGC CCCCGCCAGT CGCTGGTGCT GGGCTCGCAG
GCGCAGGTCG AGAACCTGCG CAAGATGCTG GTGGCGATGG TCGACGATGT GCGCGTGGCG
CTGATCAAGC TTGCCGAGCG GACCTGCGCG ATCCGTGCGG TGAAGTCCGC CGATGACGAG
AAACGCCTGC GGGTGGCGCG TGAGGTGTTC GACATCTATG CACCGCTGGC CCATCGTCTG
GGCATCGGCC ACATCAAGTG GGAGCTGGAA GACCTGTCCT TCCGCTACCT GGAGCCCGAT
CAGTACAAGC AGATCGCCAA GCTTTTGCAC GAGCGCCGGC TGGACCGTGA GCGCTTCATC
AGTGACGTGA TGAACCAGCT GCAGAACGAG CTGCTTGCCA CCGGGGTCAA CGCCGACATC
AGCGGGCGGG CGAAACACAT TTATTCGATC TGGCGCAAGA TGCAGCGCAA AGGCCTGGAG
TTCAGCCAGA TCTACGACGT GCGTGCGGTG CGCGTGCTGG TACCGGAAGT GCGCGACTGT
TATACCGCGC TGGGTATCGT CCATACCCTG TGGCGGCACA TTCCCAAAGA GTTCGACGAC
TACATCGCCA ACCCCAAGGA GAACGGCTAC CGTTCGCTTC ACACCGCCGT GATCGGCCCC
GAGGGTAAGG TACTGGAAGT GCAGATCCGT ACCCACGGCA TGCACGAAGA GGCCGAACTT
GGCGTCTGCG CCCACTGGCG CTATAAGGGC ACCGACGTCA AGCCCAGCTC CAATCACTAC
GAAGAAAAGA TCTCCTGGCT GCGCCAGGTG CTCGAATGGC ACGAGGAGCT GGGCGACATC
GGTGGCCTGG CCGAGCAGTT GCGGGTCGAT ATCGAACCGG ACCGGGTCTA CGTATTCACC
CCCGACGGCC ATGCCATCGA CCTGCCCAAG GGGGCCACGC CGCTGGACTT CGCCTACCGC
GTGCACACCG AGATCGGCCA CAACTGCCGT GGCGCCAAAA TCAATGGGCG CATCGTGCCG
CTCAACTACA GCCTGCAGAC CGGCGAGCAG GTGGAGATCA TCACCAGCAA GCACGGCAAC
CCCAGCCGGG ACTGGCTGAA CTCCAACCTG GGATATGTCA CCACGTCACG GGCCCGGGCC
AAGATCGTCC ACTGGTTCAA GCTGCAGGCG CGCGATCAGA ACGTCGCCGC CGGCAAGACC
CTGCTCGAGC GCGAACTCAG CCGCCTGGGC CTGCCGCAGG TAGACTTCGA ACGCCTGGCC
GAGAAGACCA ACGTCAAGAC CGCCGAGGAC ATGTTCGCCT CGCTCGGTGC CGGTGACCTG
CGCCTGGCGC ACTTGGTCAA CGCTGCCCAG CAGTTGCTCG AACCCGAGCG TATAGAGCAG
ATCGAGCTGG TACCGCGCAA GCCTACCGGC CCGCGCAATG GCAAGCGTGG CGACATTCAG
ATCCAGGGCG TCGGTAACCT GCTCACACAG ATGGCCGGCT GCTGCCAGCC GCTACCGGGC
GACGCCATCG TCGGCTACAT CACTCAGGGC CGCGGCGTGA GCATTCACCG CCAGGACTGT
GCCTCGGTGC TGCAGCTGGC TGGGCGTGAG CCGGAGCGGA TGATTCAGGT CAGCTGGGGG
CCGATACCGG TGCAGACCTA CCCGGTCGAT ATCGTTATCC GTGCCTACGA CCGCCCAGGT
TTGCTGCGTG ACGTGTCGCA GGTGCTGCTC AACGAGAAAA TCAATGTGCT GGCAGTCAAC
ACCCGCTCGA ACAAGGAAGA CAACACCGCG TTGATGTCGC TGACCATCGA GATTCCGGGC
CTGGATGCGC TGGGGCGTCT GTTGGGCAGG ATTTCGCAGT TGCCGAACAT CATCGAGACG
CGGCGTAATC GTACCCCTTG A
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| Protein sequence | MVQVRVHQPV NTDGSINLEA WLDHVVSVDS ALDRVALEEA CEFAQEIEKK GNPAKHSWAD
GTSSFQAGLE IAEILADLKL DQDSLVAAVI YRSVREGKVT LAEVGQRFGP VVSKLIDGVL
RMAAISASLS PRQSLVLGSQ AQVENLRKML VAMVDDVRVA LIKLAERTCA IRAVKSADDE
KRLRVAREVF DIYAPLAHRL GIGHIKWELE DLSFRYLEPD QYKQIAKLLH ERRLDRERFI
SDVMNQLQNE LLATGVNADI SGRAKHIYSI WRKMQRKGLE FSQIYDVRAV RVLVPEVRDC
YTALGIVHTL WRHIPKEFDD YIANPKENGY RSLHTAVIGP EGKVLEVQIR THGMHEEAEL
GVCAHWRYKG TDVKPSSNHY EEKISWLRQV LEWHEELGDI GGLAEQLRVD IEPDRVYVFT
PDGHAIDLPK GATPLDFAYR VHTEIGHNCR GAKINGRIVP LNYSLQTGEQ VEIITSKHGN
PSRDWLNSNL GYVTTSRARA KIVHWFKLQA RDQNVAAGKT LLERELSRLG LPQVDFERLA
EKTNVKTAED MFASLGAGDL RLAHLVNAAQ QLLEPERIEQ IELVPRKPTG PRNGKRGDIQ
IQGVGNLLTQ MAGCCQPLPG DAIVGYITQG RGVSIHRQDC ASVLQLAGRE PERMIQVSWG
PIPVQTYPVD IVIRAYDRPG LLRDVSQVLL NEKINVLAVN TRSNKEDNTA LMSLTIEIPG
LDALGRLLGR ISQLPNIIET RRNRTP
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