| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1193 |
|---|
| Symbol | |
|---|
| ID | 6110117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1325922 |
|---|
| End bp | 1326620 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641620963 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001748067 |
|---|
| Protein GI | 170720379 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0519929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAC CCGTACCCCG CATCCTGATC GTCGAAGACG ACCAGCGCCT CGCCGAGCTT
ACGGCTGAAT ACTTGCAGGC CAACGGTTTC GATGTGGCAG TGGAGGGCGA TGGTGCGCGC
GCCGCCCGGC GTATCGTCGA CAGCCAGCCA GACATGGTCA TCCTCGACCT GATGCTGCCC
GGTGAAGACG GCCTGAGCAT CTGCCGCCGC GTACGTGGCC AGTACGCAGG GCCCATCCTC
ATGCTCACTG CCCGCAGCGA CGAGCTCGAC CAGGTCCAGG GCCTGGACCT TGGCGCTGAC
GATTACGTGT GCAAGCCGGT GCGCCCACGC TTGCTGTTGG CACGCATCCA GGCCCTGCTG
CGGCGCAGCG AGCCGGCACA AGGCAAAACC CAAGAGCTGG CCTTTGGTGC CCTGAGCATC
GACAACCGCC TGCGCGAAGC CCGGCTCGGC GAACAGCTGA TCGAACTTAC CGGTGCCGAG
TTCGACCTGC TCTGGCTGCT GGCCAGCAAC GCCGGGCGGG TACTGTCGCG TGAGCAGATC
TTCACCGCCT TGCGCGGTGT CGGTTACGAC GGTCAGGACC GCTCCATCGA CGTGCGCATC
TCCAAGATCC GCCCCAAGAT CGGCGACGAT CCGATCCACC CCCGTCTTAT CAAGACCCTG
CGCAGCAAAG GCTACCTGTT CGTCGGCGAT GCACCATGA
|
|---|
| Protein sequence | MDQPVPRILI VEDDQRLAEL TAEYLQANGF DVAVEGDGAR AARRIVDSQP DMVILDLMLP
GEDGLSICRR VRGQYAGPIL MLTARSDELD QVQGLDLGAD DYVCKPVRPR LLLARIQALL
RRSEPAQGKT QELAFGALSI DNRLREARLG EQLIELTGAE FDLLWLLASN AGRVLSREQI
FTALRGVGYD GQDRSIDVRI SKIRPKIGDD PIHPRLIKTL RSKGYLFVGD AP
|
|---|
| |