| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1192 |
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| Symbol | |
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| ID | 6110116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1322362 |
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| End bp | 1325241 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620962 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001748066 |
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| Protein GI | 170720378 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.159136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.293014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG ACACAACTCG CGAGAACCCG CAGGCTTTGG CGCCGCAGGC CGCCGATTCC
AACCAGGATC TGGCCGCGAC CGCTCCGGGC CAGCTGCGCG TGATCAAGCG CAACGGCACT
GTCGTCCCTT ACACCGACGA CAAGATCACC GTGGCCATCA CCAAGGCGTT CCTCGCAGTT
GAAGGTGGCA CCGCCGCTGC CTCGTCGCGC ATCCACGACA CCGTCGCGCG CCTGACCGAG
CAGGTCACCG CCACGTTCAA GCGTCGCATG CCATCGGGTG GCACCATTCA CATCGAAGAA
ATCCAGGACC AGGTCGAACT GGCCCTGATG CGTGCCGGCG AGCAGAAAGT CGCCCGTGAC
TACGTGATCT ACCGCGACCA GCGTGCCAAA GAGCGCGCTA CCCGCGCCAA CACCGACGCC
GCAGTCGAGC CGCACCCAAG CATCCGCATC ACCCTGGCCG ACGGCAGCCT GGCGCCGCTG
GACATGGCGC GCCTGAACAC CATCATCAGC GAAGCCTGCG AAGGCCTGGC CGAAGTCGAT
GGCGACCTGA TCCAGCGCGA AACCCTGAAG AACCTGTACG ACGGCGTGGC CATCAAGGAC
GTCAACACCG CCCTGGTGAT GACTGCCCGT ACCCTGGTAG AGCGCGAGCC GAACTACTCG
TTCGTCACTG CCCGCCTGCT GATGGACACC CTGCGTGCCG AAGGCCTGGG CTTCCTGAAC
GTTGCCGACA GCGCCACCCA CCACGAGATG GCCGACCTGT ACGCCAAGGC CCTGCCGGCC
TACATCGCCA AGGGTGTCGA ATTCGAGCTG CTGAACCCGG CCCTGGCCGA CTTCGACCTG
GAAAAACTGG GCAAGGCGAT CAACCACGAG CGCGACCAGC AGTTCACCTA CCTGGGCCTG
CAGACCCTGT ACGACCGCTA CTTCATCCAT AAGGATGGCG TACGCTTCGA ACTACCGCAG
GTGTTCTTCA TGCGTGTGGC CATGGGCCTG GCGCTGGAAG AGAAAGACAA GGAAGCCCGT
GCGATCGAGT TCTACAACCT GTTGTCGTCC TTCGACTACA TGGCCTCGAC CCCGACCTTG
TTCAACGCCG GCACCCTGCG CCCGCAGCTG TCGAGCTGCT ACCTGACCAC CGTGCCGGAC
GACCTTTCGG GCATCTATCA CGCGATCCAC GACAACGCCA TGCTGTCGAA ATTCGCCGGT
GGCCTGGGCA ACGACTGGAC TCCTGTGCGC GCACTGGGCT CCTACATCAA AGGCACCAAC
GGCAAATCCC AGGGTGTCGT ACCCTTCCTG AAAGTGGTCA ACGACACCGC TGTCGCCGTG
AACCAGGGTG GCAAGCGCAA AGGCGCTGTC TGCGCCTACC TGGAAACCTG GCACCTGGAC
ATCGAAGAAT TCATCGAGCT GCGCAAGAAC ACCGGTGATG ACCGTCGTCG TACCCACGAC
ATGAACACCG CCAACTGGAT CCCTGACCTG TTCATGAAGC GCGTCTTCGA TGACGGCAAG
TGGACCCTGT TCTCGCCATC GGAAGTGCCA GACCTGCACG ACCTGACCGG CAAGGCCTTC
GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ACCGAGTACA ACAAGATCAA GGTGTTCAAG
ACCATCCAGG CCAAAGACCT GTGGCGCAAG ATGCTGTCGA TGCTGTTCGA GACCGGCCAC
CCATGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGCTCGC CGCAGCAGCA CGTGGGCGTG
GTCCACAGCT CGAACCTGTG CACCGAGATC ACCCTGAACA CCAACAAGGA CGAGATCGCG
GTCTGCAACC TGGGCTCGAT CAACCTGCCG AACCACATTG TCGACGGCAA GCTGGACACC
GCCAAGCTGC AACGCACCGT GAACACCGCC GTGCGCATGC TCGACAACGT GATCGACATC
AACTACTACT CGGTGCCGCA AGCGCGCAAC TCGAACTTCA AGCACCGCCC GGTCGGCCTG
GGCATCATGG GCTTCCAGGA CGCGCTGTAC CTGCAGCACA TCCCGTACGG CTCCGACGCT
GCCGTCGAGT TCGCCGACAA GTCGATGGAA GCGGTCAGCT ACTTCGCGAT CCAGGCGTCC
TGCGACCTGG CCGATGAGCG TGGCGCGTAC GAGACCTTCC AGGGTTCGCT GTGGTCCAAA
GGCATCCTGC CGCTGGATTC GCAACAGATC CTGATCGAGG CCCGTGGCCA GAAGTACATC
GACGTCAACC TGGAAGAAAC CCTGGACTGG GCGCCGGTAC GGGCCCGCGT ACAGAAAGGC
ATCCGTAACT CGAACATCAT GGCCATCGCG CCGACCGCGA CCATCGCCAA CATTACCGGC
GTGTCGCAGT CCATCGAGCC GACCTACCAG AACCTGTACG TGAAATCGAA CCTGTCGGGC
GAGTTCACCG TGATCAACCC GTACCTGGTC CGCGACCTGA AAGCCCGCGG CCTGTGGGAC
TCGGTCATGA TCAACGACCT GAAGTACTAC GACGGTTCGG TGCAGCAGAT CGAGCGTATT
CCGCAGGAAC TCAAAGACCT GTACGCCACC GCGTTCGAAG TCGAGACCAA GTGGATCGTC
GATGCCGCCT CCCGTCGCCA GAAGTGGATC GACCAGGCGC AGTCGCTGAA CCTGTACATC
GCCGGCGCTT CGGGCAAGAA GCTGGACGTG ACCTACCGCA TGGCCTGGTA CCGTGGCCTG
AAAACCACCT ACTACCTCCG TGCCCTGGCC GCGACCAGCA CCGAGAAGTC GACCATCAAC
ACCGGCAAGC TCAACGCCGT TTCCAGCGGC GGCGACAGCG CCCCGGCCCA GGCCGCAGGC
CCGGCGCCAG TGCCGAAGGC TTGCGCGATC GACGAGCCGG ACTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTDTTRENP QALAPQAADS NQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYRDQRAK ERATRANTDA AVEPHPSIRI TLADGSLAPL DMARLNTIIS EACEGLAEVD
GDLIQRETLK NLYDGVAIKD VNTALVMTAR TLVEREPNYS FVTARLLMDT LRAEGLGFLN
VADSATHHEM ADLYAKALPA YIAKGVEFEL LNPALADFDL EKLGKAINHE RDQQFTYLGL
QTLYDRYFIH KDGVRFELPQ VFFMRVAMGL ALEEKDKEAR AIEFYNLLSS FDYMASTPTL
FNAGTLRPQL SSCYLTTVPD DLSGIYHAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN
GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHLD IEEFIELRKN TGDDRRRTHD
MNTANWIPDL FMKRVFDDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL TEYNKIKVFK
TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSINLP NHIVDGKLDT AKLQRTVNTA VRMLDNVIDI NYYSVPQARN SNFKHRPVGL
GIMGFQDALY LQHIPYGSDA AVEFADKSME AVSYFAIQAS CDLADERGAY ETFQGSLWSK
GILPLDSQQI LIEARGQKYI DVNLEETLDW APVRARVQKG IRNSNIMAIA PTATIANITG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKARGLWD SVMINDLKYY DGSVQQIERI
PQELKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTIN TGKLNAVSSG GDSAPAQAAG PAPVPKACAI DEPDCEACQ
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