Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1190 |
Symbol | |
ID | 6110114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1318539 |
End bp | 1319777 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620960 |
Product | outer membrane porin |
Protein accession | YP_001748064 |
Protein GI | 170720376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.569611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.287254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT GCCATACCCT TCCCTTTGCC CTGCTGGGCG CCGGCATGAT CGGGAGCTTG CCGGGCACCA GCGTGGCCGC AGGCTTCATC GAAGATTCCA AAGCCACGCT TGGCCTGCGC AACTTCTATA TCAACCGCAA CTTCACCAAC CCCAGTAACC CGCAGAGCAA GGCCGAGGAG TGGACGCAAA GCTTCATCCT CGATGCACGC TCTGGGTTCA CCGAAGGGCC GATCGGCTTC GGCGTGGATG TGCTGGGGAT GTGGTCGGTG AAACTCGATG GCGGTGGCGG CACCTATGGC ACTGCCCTGC TGCCGCGCCA TGACGATGGG CGGCCGGCGG ATGACTTCGG GCGCCTGGCT GTGGCGGGCA AGGCGCGGAT TTCCAAGACT GAACTGAAAG TCGGCGAGTG GATGCCGGTG CTGCCGATCC TGCGTTCCGA CGATGGCCGC TCGTTGCCAC AGACCTTCCG CGGTGGGCAG GTCACCTCTA ACGAAATCGC CGGGCTGACG CTGTACGGCG GGCAGTTCCG CGGCAACAGC CCGCGCAACG ACGCCAGCAT GGACGACATG AGCTACGGCG GCGGCCTGTC GGACCGTTTC AACTTCGTCG GTGGCGAATA CAAGTTCAAC CAGGACCGCA CGCTGGTCGG GCTGTGGAAC GCAGTGCTCA AGGACGTCTA TGAGCAGCAG TACCTGCAAC TGAGCCACAG CCAGCCGGTC GGCAGCTGGA CCTTTGGCGC CAACCTCGGT TACTTCCATG GTGGCGAAGA CGGCTCCGAA AAGGCCGGGC AGCTGGACAA CAAGACCTAT TCGGGGATGT TCTCGGCCAA GTATGGCGGC AACACGTTCT GGGTGGGCCT GCAGAAGGTC GATGGCGATA CCTGGATGCG GGTCAACGGC ACCAGCGGCG GCACCTTGGC CAACGACAGC TACAACTCCA GCTTCGACAA TGCCAATGAG CGCTCCTGGC AGGTGCGTCA TGACTTCAAC TTCGTCACCG TTGGCGTGCC GGGGCTGACG CTGATGAACC GCTACATCAG CGGGCAGGAC GTGCATACCG GGGCGGTGAC CGACGGCAAG GAGTGGGTGC GGGAAACGGA GCTGGCCTAT GTGATCCAGA GCGGGGCGTT CAAGGATTTG AGCGTCAAAT GGCGCAACTC GTCGATTCGG CGCGACTACA GCAACAACGA ATTCGATGAG AACCGGTTGA TCTTCAACTA CCCGCTGTCG CTGTTGTAA
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Protein sequence | MKICHTLPFA LLGAGMIGSL PGTSVAAGFI EDSKATLGLR NFYINRNFTN PSNPQSKAEE WTQSFILDAR SGFTEGPIGF GVDVLGMWSV KLDGGGGTYG TALLPRHDDG RPADDFGRLA VAGKARISKT ELKVGEWMPV LPILRSDDGR SLPQTFRGGQ VTSNEIAGLT LYGGQFRGNS PRNDASMDDM SYGGGLSDRF NFVGGEYKFN QDRTLVGLWN AVLKDVYEQQ YLQLSHSQPV GSWTFGANLG YFHGGEDGSE KAGQLDNKTY SGMFSAKYGG NTFWVGLQKV DGDTWMRVNG TSGGTLANDS YNSSFDNANE RSWQVRHDFN FVTVGVPGLT LMNRYISGQD VHTGAVTDGK EWVRETELAY VIQSGAFKDL SVKWRNSSIR RDYSNNEFDE NRLIFNYPLS LL
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