| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1172 |
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| Symbol | |
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| ID | 6110091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1292082 |
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| End bp | 1293167 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620937 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001748046 |
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| Protein GI | 170720358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00821476 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00260233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAACC GCAGCGGCAA GGGACTTTCT TTCGTCAGGC GTATCTATCT GCCACGGGTG
ATCGGCCTTG GCATTGGGCT GTTCAGCGTC GCCGCAGCGG TCGCGCCACT TTCGCCCCCC
ACCTGGGCAT GGTTGCTGCT GCTCTTCAAC GGATTGCTCT GGCCCCATTT GGCCTATCAA
TGGGCACGGC GCTCGATTGC ACCGTACCAG GCGGAACAGC GCAATCTGTT GCTGGACTCA
CTGATGGGTG GCTTCTGGAC CGCAGCCATG CATTTCAACC CCCTGCCCTG CGTCACTGTG
CTCTCGATGA TGACCATGAA CAATGTGGCC GCTGGCGGCA AGCGCTTGGT CCTGCGAGGG
CTAATGGCAC AACTGGTCGG TGTGCTGCTA GCCAGCGCAT TGCTGGGCAC AGGGTTACAG
CTCGACGCTA CACCACTGCA GATCTATGCC TGCCTGCCAA TGCTGACACT CTATCCACTG
GCCCTGGGTT GGGTGTGTTA CCGCCTGGCG ATCAAGCTCG CCGAGCACAA GCGCCGCCTT
CGCGACCTGA GCCTGACCGA CAGTCTGACC GGGCTGCTCA ATCACGGTGC CTGGAAGGAC
CTGCTCCTGC TGCGCTTCCA GGCTTGCCAG AACTTGCAGA TGCCATCAGT GATTGCCCTG
ATCGATATCG ACCATTTCAA GACCATCAAT GACACGTTCG GCCACGTGGT CGGCGATTGC
GTGCTGCGAA AGATGAGCGA TGAGCTCAGA CGCAACCTGC GGGCGGGCGA CCTGGCGGGG
CGCTATGGTG GCGACGAATT TTGCGTGATT CTGCCCGATA CCAGTGAGAG TGAGGCCAGG
CAGGCCATGG AGCGTCTGCG CGAGCGCATC GTTTGCTACC GTGACCCACA ACTGCCGCAT
TTGAAAATCA GCCTGAGTAT CGGCATGTCA TCCTTCCGGG CAGACCTCCA ATCCCCCGAA
CACTGGCTGG AAAAGGCCGA CAAGGCACTC TATTGCGCCA AGCGACGCGG TCGCGATCAG
GTCAATTTCG AACATGACGA GACCACAACG CTTCAGCCCG CATCCCTGGC AGAATATCCT
CGCTGA
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| Protein sequence | MDNRSGKGLS FVRRIYLPRV IGLGIGLFSV AAAVAPLSPP TWAWLLLLFN GLLWPHLAYQ
WARRSIAPYQ AEQRNLLLDS LMGGFWTAAM HFNPLPCVTV LSMMTMNNVA AGGKRLVLRG
LMAQLVGVLL ASALLGTGLQ LDATPLQIYA CLPMLTLYPL ALGWVCYRLA IKLAEHKRRL
RDLSLTDSLT GLLNHGAWKD LLLLRFQACQ NLQMPSVIAL IDIDHFKTIN DTFGHVVGDC
VLRKMSDELR RNLRAGDLAG RYGGDEFCVI LPDTSESEAR QAMERLRERI VCYRDPQLPH
LKISLSIGMS SFRADLQSPE HWLEKADKAL YCAKRRGRDQ VNFEHDETTT LQPASLAEYP
R
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