| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1169 |
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| Symbol | |
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| ID | 6110088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1289460 |
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| End bp | 1290326 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620934 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001748043 |
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| Protein GI | 170720355 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.595909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00058772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTGCTG TCGTCCGTAC CCTGGTGACC CTCTGCGTGG TCGCCATCGC CGTTCTGGCC
GGCTATAAGC TCTGGCAGTA CTACATGCTC ACCCCATGGA CGCGTGATGC ACGGGTGCGG
GCCGACGTGG TGGTCATCGC GCCCGACGTG TCCGGCTGGG TGCGTGAGCT CAAGGTGCAG
GACAACCAGC GGGTCAAGGC TGGCGACCTG TTGATGAGCA TAGATCGTGA GCGCTTTCAG
GCTGCATTCG ATCAGGCCAC CGCGGTGGCA GAAACGCGTA CCCAGCAGTT GCACCTGCGC
GAGCGCGAAG CTGCGCGGCG CACGGCTCTG GGGCCCGGGG CGATCAGCGC CGAGCTGCGC
GAAAACGCGC AAATCAATGC CGCCATTGCC CGCGGTGAGT TGCATGAAGC GCAAGCTCAG
TTACAGGTGG CGAAAATCAA CCTTGCGCGC AGCGAAGTGC GAGCCCCCCG CAGTGGGCAC
ATCACAAATT TGCGCCTGGC TCAGGGCAAC TATGTGAACG CCGGCCAGTC GGTAATGGCC
CTGGTGGATG ACTCGACCTT TTTTATTCAG GCCTATTTCG AGGAAACCAA ATTACCGCGC
ATACGTGTGG GCGATTCGGT GAAGGTCTGG CTGATGGGGG CAGGAGAGGC CATGCAGGGG
CATGTGGAAA GCATCAGCCG GGGTATCACC GACAGTAACA GTAACCCGGA CAGCCAGTTG
TTGCCGGAGG TTGAGCCAAC CTTCAACTGG GTAAGGCTGG CCCAGCGGAT ACCTGTGCGC
ATCAGGCTGG ACGACATTCC CGAAGGCATG AACCTCAGCG CGGGGATGAC GGCCAGTGTG
CAGGTTCACG AGGATTCGCC CGAGTGA
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| Protein sequence | MRAVVRTLVT LCVVAIAVLA GYKLWQYYML TPWTRDARVR ADVVVIAPDV SGWVRELKVQ
DNQRVKAGDL LMSIDRERFQ AAFDQATAVA ETRTQQLHLR EREAARRTAL GPGAISAELR
ENAQINAAIA RGELHEAQAQ LQVAKINLAR SEVRAPRSGH ITNLRLAQGN YVNAGQSVMA
LVDDSTFFIQ AYFEETKLPR IRVGDSVKVW LMGAGEAMQG HVESISRGIT DSNSNPDSQL
LPEVEPTFNW VRLAQRIPVR IRLDDIPEGM NLSAGMTASV QVHEDSPE
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