Gene PputW619_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1148 
Symbol 
ID6110067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1267145 
End bp1268290 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID641620913 
Productbeta-lactamase 
Protein accessionYP_001748022 
Protein GI170720334 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.295491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.227659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATCC AGGGTCACTA TGAGCTGAAG TTCGAGGCAG TGCGTGAAGC GTTTGCGGCA 
TTGTTCGATG ATCCCCAGGA GCGCGGCGCG GCGCTGTGCA TCCAGGTCGG TGGCGAGACT
GTAATCGACC TTTGGGCGGG CAGCGCCGAC AAAGACGGCC AGCAGGCCTG GCACAGCGAT
ACCATCGCCA ATCTCTTCTC CTGCACAAAG ACCTTCACTG CCGTCACGGC GCTGCAGCTG
GTCGGTGAAG GCAAGCTGGC GCTGGATGCT CCGGTGGCGC GCTACTGGCC CGAGTTTGCC
CAGGCAGGCA AAGAGAGCGT CACCCTGCGC CAACTGCTCA GCCACAGAGC GGGTTTGCCC
GCCATCCGCG AACTGCTGCC AGCAGAGGCC CTGTATGACT GGCAAGCCAT GGTCGATGCG
CTGGCCGCCG AGACACCTTG GTGGACGCCT GGTACAGCGC ACGGCTATGC CGCCATCACC
TACGGCTGGC TGATCGGCGA GTTGATCCGT CGCGCCGATG GCCGTGGCCC TGGGGAGTCG
ATTGTGGCGC GTACCGCGCG GCCGCTGGGG CTGGACTTCC ATGTAGGCCT GGCAGACGAA
GAATTCCATC GCGTGGCCCA TATCGCACGC GGCAAGGGCA ACGCCGGCGA TGCTGCCGCC
CAGCGCTTGC TGCAGGTGAC CATGCGTGAG CCCGAAGCGT TGTCTACCCG TGCGTTCACC
AACCCGCCGG CCATCCTCAC CAGTACCAAC AAGCCTGAGT GGCGCCGCAT GCAGCAACCG
GCGGCCAACG GTCACGGCAA TGCCCGTAGC CTGGCGGGTT TCTATGCCGG CCTGCTCGAC
GGCAGCCTGC TCGAGTCTGA ATTGCTCGAT GAACTGACGC GTGAACACAG CATCGGCGAG
GATCGTACCC TGCTGACCCA GACCCGTTTC GGCCTTGGCT GCATGCTTGA CCAGCCCGCA
GTGGCCAACG CCACATTCGG CCTGGGTGCG CGGGCCTTTG GGCATCCCGG CGCAGGTGGT
TCGGTCGGTT TTGCCGACCC CGAGCACGAC GTTGCTTTCG GTTTCGTGGT CAATACCCTC
GGCCCTTACG TGCTCATGGA CCCAAGAGCC CAGCAACTGG TGCGTGTCCT TGGTACTTGC
CTTTGA
 
Protein sequence
MQIQGHYELK FEAVREAFAA LFDDPQERGA ALCIQVGGET VIDLWAGSAD KDGQQAWHSD 
TIANLFSCTK TFTAVTALQL VGEGKLALDA PVARYWPEFA QAGKESVTLR QLLSHRAGLP
AIRELLPAEA LYDWQAMVDA LAAETPWWTP GTAHGYAAIT YGWLIGELIR RADGRGPGES
IVARTARPLG LDFHVGLADE EFHRVAHIAR GKGNAGDAAA QRLLQVTMRE PEALSTRAFT
NPPAILTSTN KPEWRRMQQP AANGHGNARS LAGFYAGLLD GSLLESELLD ELTREHSIGE
DRTLLTQTRF GLGCMLDQPA VANATFGLGA RAFGHPGAGG SVGFADPEHD VAFGFVVNTL
GPYVLMDPRA QQLVRVLGTC L