| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1147 |
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| Symbol | |
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| ID | 6110066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1264770 |
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| End bp | 1267037 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620912 |
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| Product | Beta-agarase |
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| Protein accession | YP_001748021 |
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| Protein GI | 170720333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.821905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.315056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC GCACCTTGCC TGCTGTTCTC ACCCTGTTGC TCAGCACGCC TGCAATGGCC
GGGCAGCAGA CGCTGTTCAG CTTCGTGCGC CCGGCTTCGG TCGTCAACGT GGCGACCGAA
GGGGCCGGCA TGCCGCAGTA CAACGCCGAA CAGACCGCAG AAGGCGAGGT GTTGCGGCGG
GTGGTGTTCA ACCCGGTTGA ACGGCCGACC CTGCGGCTGA GCCCACAGAG TGGTGCATGG
GATTGGTCGG CCGGGCAGTT TCTGACCTTG CGCCTGCAAA GTGCCATGGA CTGGGCACTG
ACCGTCGATG TCACGGTGCT GGGCAGCGAT GGCCGTACTC TGACCAGCCG TATCGACCTG
CCTGCAGGGC CTGCGCAGAC GGTCATGGTG CCGCTCAAGG CCAGCTCCCC TCTGAGCCAG
GGCATGCGCG CCGGCCCACC GATGCCCTGG AACCATGAAG GGCAACGGTT GCTGCTGACC
AGCAGCGCCG GTGAGGTCGA TCTCAAGCAG GTGGTATCCG TCAGCTTGAG CATTCCCGGC
CCCAAGGTTG CGCAGAACCT GCTGATCGAA AAGGTCGGTA TCCAGGACGA TGACCTTGCC
TACCAGGCGG CCTACCACGC ACTGATCGAC GCTTACGGCC AGTCCACTCG CGGCCGCTGG
CCCGAGAAGG TGGTCAACGA TGAACAACTG AAGGCTGCTG ACAACCGTGA GCTGCAACAG
CTCAAGGCCT GGCTGGCCGA GCATCACAAG CAACAGCTGG ACAGCTACGG CGGCCTGCTT
GCCGGGCCGG CGTTCGAGGC CAAGGGTTTC TTCCGTACGG AAAAACGTGA CGGCCGCTGG
CACCTGGTAA CCCCCGATGG CCATCCGTTT TACTCGTTGG GCGTCAATGC AGTGGCTGCC
GATGGCGGGC GTACCTATGT CGCCGGCCGC GAAGGGATGT TTGGTGTGCT ACCGGGCGAA
GGTGACGCAC TTGGCGCCTT TTATGGCGAG GGCAACAACG ATGATGGCAA TGCATCGTCG
CAGGGGCGCA ACTTCAAGAA GGGGCGCTGG TTCGACTTCT ATGCGGCCAA CATCCACCGC
GCCCATGGCA AGCCTTGCCC GGCAGGGGGG GAGGTGCAAC CTGCCGCGCC CTGTCCGCCG
CCTTCGCTGG ATACCGCTCG TTGGCAGGCA CATACGCTCG ATCGTTTGCA GGCCTGGGGC
TTCAATACCC TGGGCAACTG GAGCGACCCT GAACTCGGCC AGGCCAAACG CATGCCCTAT
ACCCTGCCGC TGTCGATCGT CGGTGACTAT GCCAGCATCA GCACAGGCAT GGACTGGTGG
GGGCGCATGC CCGACCCGTT CGATCCGCGT TTCGCCATGG CCACCGAGCG TGCTGTGGCC
ATCGCCGCCC GTGACCACCG GGATGATCCT TGGCTGATCG GTTACTTTGC CGATAACGAG
CTGGCCTGGG CTGCGCCTGG TAATGACCCC AAGGCCCGTT ACGGCCTTGC CTATGGCACC
CTGCGTCTGA CAACCGATGT GCCGGCCAAG CGTGCCTTCC TCAAGCAACT GCGCGACAAG
TACCGTAACC AGCAGGGGCT GTCCAAGGCC TGGGGCATTG ACCTGCAAGC CTGGGAATTG
ATGGAAGACC CAGGCTTCGA GGCGCCGCTG CCCAACCCCG AGCACCCTGA GATCGAACGC
GATTACCAGC ACTTCCAGCA GGTGTTCGCC GAAACCTATT TCAAGACCAT CGCCGATTCG
CTGAACTGGC ATGCGCCCAA CCACCTTCTG CTGGGCGGGC GCTTTGCCGT CAGCACACCC
GAAGCGGTCA AGGCCTGCGC CGAGTTCTGC GATGTGCTGA GCTTCAACTT CTATACCCTC
AAACCCGATG ACGGCTACGA CTTCGCCCAG CTGGCGGAGC TGGACAAGCC GGTGCTGGTG
TCCGAATTCC AGTTCGGTTC TCGTGACCGT GGGCCTTTCT GGCCGGGGCC GGTGGAAGTG
GCGCGTGAAG AGGATCGTGG CCCGGCCTAC GGCAACTTCC TCAAGGCGGC ATTGGCGCAG
CCGATGATCG TCGGCGCTCA CTGGTTCCAA TATCTCGACC AGCCTGCCAG CGGGCGTTTG
CTCGATGGCG AAAACGGGCA CCTTGGGTTG GTGGCGATCA CCGATACGCC GTATCCGGAT
TTTGTCGAGG CGGTGCGCAA GAGTAACCGG AAGGCCGTTG GTCAGTTGAG CAGCCTGTTG
CACGAAGGGG GCTCTACCAC GGGGGCGCCA ACCGACGAGG CGCCCTGA
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| Protein sequence | MIRRTLPAVL TLLLSTPAMA GQQTLFSFVR PASVVNVATE GAGMPQYNAE QTAEGEVLRR
VVFNPVERPT LRLSPQSGAW DWSAGQFLTL RLQSAMDWAL TVDVTVLGSD GRTLTSRIDL
PAGPAQTVMV PLKASSPLSQ GMRAGPPMPW NHEGQRLLLT SSAGEVDLKQ VVSVSLSIPG
PKVAQNLLIE KVGIQDDDLA YQAAYHALID AYGQSTRGRW PEKVVNDEQL KAADNRELQQ
LKAWLAEHHK QQLDSYGGLL AGPAFEAKGF FRTEKRDGRW HLVTPDGHPF YSLGVNAVAA
DGGRTYVAGR EGMFGVLPGE GDALGAFYGE GNNDDGNASS QGRNFKKGRW FDFYAANIHR
AHGKPCPAGG EVQPAAPCPP PSLDTARWQA HTLDRLQAWG FNTLGNWSDP ELGQAKRMPY
TLPLSIVGDY ASISTGMDWW GRMPDPFDPR FAMATERAVA IAARDHRDDP WLIGYFADNE
LAWAAPGNDP KARYGLAYGT LRLTTDVPAK RAFLKQLRDK YRNQQGLSKA WGIDLQAWEL
MEDPGFEAPL PNPEHPEIER DYQHFQQVFA ETYFKTIADS LNWHAPNHLL LGGRFAVSTP
EAVKACAEFC DVLSFNFYTL KPDDGYDFAQ LAELDKPVLV SEFQFGSRDR GPFWPGPVEV
AREEDRGPAY GNFLKAALAQ PMIVGAHWFQ YLDQPASGRL LDGENGHLGL VAITDTPYPD
FVEAVRKSNR KAVGQLSSLL HEGGSTTGAP TDEAP
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