Gene PputW619_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1143 
Symbol 
ID6110062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1260956 
End bp1261669 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641620908 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001748017 
Protein GI170720329 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.667913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA TGTCAAAGGC GGCGCTGCCG TTGCTGGTGG TTTCCAGCCT GCTGGCAGGC 
TGCGCCACCC ACAGTGACGG CAGTGCGCCC CTCAATCAAC GGACCTGGCC CATCTGCAGC
CTGCTCGGTG GGCTGGCCGG CGGTGGCCTG GGCGCTATCG AAAGCTCGAG CTGGGCTGCA
GGCGGTGGCG CCCTGGGGGC GATCGCCGGC GGCCTGATCT GTTACGCCCA GGATGGGGAT
GAAGATGAGG ATGGTGTCTT CGATCGCCGT GACCGTTGCC CTGACACGCC TGCTGGCACG
GCGGTCGACC ACATGGGCTG CCCGCTGCCG CAGTATCCGC CCAGCCAACC TGCACCCGAC
CCCCAGCCCC AGGTGATCTC CCTCGACGAC CAGGGCCAGG TGATGTTCGC ATTCGACTCT
GCCGACTTGA CGGCGGGTAG CCAGCAACGG CTGCAAAGCC TGTTGCCCAG GCTCAACGAG
CTGGGTGTAT CGCGGATCAA GGTAGTCGGC CATACCGACA ATGTCGGGTC CGACAGTTAC
AACCAGGCAC TCTCCGAGCG GCGCGCTGCC AGCGTCGCAC AGTATTTGAT CAGCCAGGGC
CTGGCACCGC AGAAGGTGAC GAGCGAGGGG CGCGGGGCTA GCGAGCCGGT GGCAGAAAAC
GACACCGAAC AAGGCCGTGC GCAAAACCGG CGGGTGGACC TGCACCTTAA CTGA
 
Protein sequence
MSVMSKAALP LLVVSSLLAG CATHSDGSAP LNQRTWPICS LLGGLAGGGL GAIESSSWAA 
GGGALGAIAG GLICYAQDGD EDEDGVFDRR DRCPDTPAGT AVDHMGCPLP QYPPSQPAPD
PQPQVISLDD QGQVMFAFDS ADLTAGSQQR LQSLLPRLNE LGVSRIKVVG HTDNVGSDSY
NQALSERRAA SVAQYLISQG LAPQKVTSEG RGASEPVAEN DTEQGRAQNR RVDLHLN