Gene PputW619_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1134 
Symbol 
ID6110053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1252510 
End bp1254171 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content64% 
IMG OID641620899 
ProductATP-dependent DNA ligase 
Protein accessionYP_001748008 
Protein GI170720320 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.720613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCT TTGCCCAGCT CTACCTGCGC CTGGATGCCA CCACCTCCAG CAATGGCAAA 
CTGCAAGCAT TGCGCGACTA CTTTGCCGCA GCCCCCGCCG AGGATGCCGC CTGGGCTGTC
TATTTCCTCT CCGGTGGCCG ACCACGGCAG TTGGTGCCCA CCCGGGTGCT ACGCGAACTG
GCAACGGCAT TGGCCGGACT GCCGGGCTGG TTATTCGACG AAAGCTATCA GGCCGTGGGC
GACCTGGCGG AGACCATCTC TCTGTTGCTG CCTGAAAACC AGCAAGGTAG CAAGAGCGGG
CTGGCCCATT GGGTCGAAAC CCATCTGCTC CCACTGCGTG GGCTGCCCGC CGAAGAGGTC
CAGCAGCGCC TGCCGCCACT GTGGGCAGAG TTGGATCGCC CCAGCCTGAT GCTGTGCCTG
AAGCTGATCA CCGGCAGCTT TCGCGTGGGC GTGTCCAAGC TGCTGGTCAC CCGGGCACTG
GCGCAGCTGG CCGGGCTGGA TGCCAAACGC ATAGCTCAGC GCCTGGTCGG CTATACCGAC
ATCAGCCATC GCCCGACAGC CAACAGTTAC CACAAGCTGA TCGCCGCTGA ATCGGCCGAT
GAACATAGCC AGCGCGGTGG CCAACCTTAC CCGTTCTTCC TGGCGCATGC CCTGCAGGCC
CCCCTCGAAC AGTTCGACGC CCTGCTCGGC CCGCCCAGCG CCTGGCAGAT CGAATGGAAG
TGGGATGGCA TCCGCGCACA AGTGGTCAAG CGCGATGGCC AGGTGTGGGT GTGGTCACGC
GGCGAAGAGC TGGTCACCGA CCGCTTCCCG GAGCTGCACG GCCTGGCGCA GAACCTTCCC
GACGGCGTCG TGCTCGACGG TGAGATCCTG GTCTGGAAGC CTGATTCGGG CAACGACCAG
GCACTGGCCG TACAACCTTT CGCGCTACTG CAGCAGCGCA TTGGCCGCAA GACGCTGGGC
AAGAAGCTGC TGGCCGATGC TCCGGTGGTA CTACAGGCCT ACGACTTGTT GGAGTGGCAA
GGCGAGGACT GGCGTAATCA CCCCCAACAT GAGCGACGCC AGCAATTGCA GCGGCTCGTC
GAAGACTACC CCTTGGCCCC AATACTGCTA TCGCCTCTAC TCGAAGGGAA GGATTGGCAC
GCGCTTGCCA TCCAGCGCGA CCGATCGCGC AGCCTGGGGG TCGAGGGTCT GATGCTCAAG
CAGCGCGATG CGTTGTACGG GGTGGGCCGG ACCAAGGACA TGGGGGTGTG GTGGAAGTGG
AAGATCGACC CGTTCAGCGT GGATGCGGTG CTGATCTATG CCCAGCGCGG CCACGGCCGG
CGTGCCAGTC TTTACAGTGA CTACACCTTC GCGGTCTGGA ACGCGCCACC CGGCGCCCCC
GAGCGTGCCT TGGTACCTTT TGCCAAGGCC TACTCGGGCC TGAGCGATGA AGAAATGCGC
AAGGTCGATG CAATCATTCG CAAGACCACG GTGGAGACCT TCGGACCGGT GCGCAGCGTC
AAGCCAACGC TGGTGTTCGA ACTGGGGTTC GAGGGCATCG CCCTGTCAAA ACGGCACAAG
AGCGGGATAG CCGTGCGTTT TCCGCGCATG CTGCGCTGGC GCCTGGATAA GCCTGTGGAG
GAGGCCGATG ACCTGGCGAC CTTGCAGGCG CTGCTCGCCT GA
 
Protein sequence
MKAFAQLYLR LDATTSSNGK LQALRDYFAA APAEDAAWAV YFLSGGRPRQ LVPTRVLREL 
ATALAGLPGW LFDESYQAVG DLAETISLLL PENQQGSKSG LAHWVETHLL PLRGLPAEEV
QQRLPPLWAE LDRPSLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR IAQRLVGYTD
ISHRPTANSY HKLIAAESAD EHSQRGGQPY PFFLAHALQA PLEQFDALLG PPSAWQIEWK
WDGIRAQVVK RDGQVWVWSR GEELVTDRFP ELHGLAQNLP DGVVLDGEIL VWKPDSGNDQ
ALAVQPFALL QQRIGRKTLG KKLLADAPVV LQAYDLLEWQ GEDWRNHPQH ERRQQLQRLV
EDYPLAPILL SPLLEGKDWH ALAIQRDRSR SLGVEGLMLK QRDALYGVGR TKDMGVWWKW
KIDPFSVDAV LIYAQRGHGR RASLYSDYTF AVWNAPPGAP ERALVPFAKA YSGLSDEEMR
KVDAIIRKTT VETFGPVRSV KPTLVFELGF EGIALSKRHK SGIAVRFPRM LRWRLDKPVE
EADDLATLQA LLA