Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1132 |
Symbol | |
ID | 6110051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1248775 |
End bp | 1251228 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620897 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001748006 |
Protein GI | 170720318 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAGCC CTCCTGACAT CGCCAATGCC TGGTTTCGCA TGCGCGGCTG GAAGCCCTTC GCCTTCCAGC GCCAAGCCTG GGCCGCGGTC GGACGTGGCG AATCGGGGCT GCTACATGCC AGTACCGGCG CAGGCAAGAC CTACGCACTC TGGCTGGCCG CACTGCGCAC CTTCGCCAAG CCGGGCGCAG GGCGGCAGCC GGCGCCATTG CAGGTCTTGT GGATTACCCC CATGCGCGCG CTGGCGGCCG ACACTGCACG TGCATTGCAA GCTCCGCTGG ACGACCTTGG CCTGAACTGG AGTGTCGGCG TACGCAGCGG CGACACTGGC AGCGCCGAGC GCGCCCGGCA GGCCCGGCGC CTGCCGAGTA CATTGATCAC CACACCCGAG AGCCTGACCC TGCTATTGAC GCGGGCGAAA GCCTGCGATG ATTTCGCCAG CCTGCGCATG GTCGTGGTGG ATGAATGGCA CGAACTGCTC GGCAACAAAC GCGGCGTACA GCTGCAATTG GCCCTGGCAC GCTTGCGTCG CTGGCATCCG CAGCTAGTGA CCTGGGGGCT ATCTGCCACC TTGGGCAACC TGCCGCATGC GCTCGAGGTA CTGGTGCCCA AGGGCGGCCG ACTGATAAAG GGCCGCCAGG ACAAGCGTCT GGTCGTCGAT ACGCTCCTGC CCGAGGCCAT CGAACGTTTT CCCTGGGCCG GGCACATGGG GCTGAAGATG CTCGCTCAGG TTGCCCGTGA GCTCGACACC AGCGCCAGCA GCCTGGTATT CACCAACACC CGTGCCCAAG CCGAACTGTG GTACCAGGCC CTGCTGGACG CCCGTCCCGA CTGGGCTGGG CAGATTGCCC TGCACCACGC CTCGCTGGCC CGCGCAACCC GCGACTGGGT GGAACTGAGC CTCAAGCAGG GCACGCTCAA GGCAGTGATC TGTACCTCCA GCCTGGACCT GGGTGTGGAC TTTTTGCCTG TGGAACGGGT GTTGCAAATT GGCTCGGCCA AGGGCGTCGC CCGCCTGATG CAACGGGCCG GGCGCTCCGG GCACGCCCCG GGGCGCCAGT CACGGGTCAC CCTGGTGCCG ACTCACAGCC TGGAGCTGGT CGAGGCAGCA GCCGCTCGCA GTGCACTTAC GGCGGGCCAT ATCGAGGCCC GTCGCTCCCC GCGGCTGTGC ATGGATGTGC TGGTCCAGCA CCTGGTCAGC ATGGCGTTGG GCTGCGGCTT TCGCCCCGCT GAGCTACTCA CCGAGGTACG CAGCACATGG GCTTTCTGCG ATTTGCGCGA CAGCCAGTGG CAGTGGGCAC TGGACTTTGT TTGCCACGGC GGCAGCTCGC TCAGTGCCTA CCCCGATTAC CAGCGCGTCG AGGCCCACAG CGATGGCGTA TGGCGGGTCG TCAGCGAGCG CTTGGCGCGG CGCCACCGCA TGGGCATCGG CACCATCGTC AGCGACGCCA GCCTGCAGCT CAAGTATTGG AGCAAAGGCG GCGGCGGCAA GCATCTGGGC AGTGTCGAGG AAGCGTTTAT CGCCCGCCTG CGTCCAGGCG ACACCCTGGT ATTCGCGGGC CGGATACTGG AGCTTGTGAG GGTGGAAAAC ATGACCGCCT ATGTACGCCG AAGCAACGCC CGCAAAGCCG CCGTAGCCCG CTGGAATGGC GGGCGCATGC CGCTATCCAG CGAACTGGCC GATGCCCTGG TGGAAAAACT CGACGCCGCA GCCCGCGGCC ATTTCGACGA TCCGGAAATG CGCACGGTGC GGCCCTTGCT CGCACTCCAA GGCCAGTGGT CGGCCTTGCC TACCACGCAG ACGCTGCTGG CCGAAACCCT TGTCACACGC CAAGGTTCAC ACTTGTTTGT CTACCCGTTT GCCGGGCGCA TGGCCAATCT TGGTCTGGCC AACCTGATTG CCTGGCGGGT CAGCCGCAAC CAGCCGCTAT CGGTATCCAT TGCCGTCAGC GACTACGGCT TCGAACTGCT TAGTCCAACC CCTGTCGACT GGGCAAGGTA CCTGCCCGCA GCGATGTCCA CCGAGCACTT GCTGGAAGAT GTACTGGCCA GCCTGAACGC TAGTGAGATG GCCTTGCGGC GCTTTCGCGA AATCGCGCAG ATCTCGGGGC TGGTGTTCGG CGGATACCCG GGCGCGCAGA AAAGCACCCG GCAGATCCAG GCTTCCAGCG GGCTGTTCTA CGAGGTGTTT CGCAAGCATG ACGCCGATAA CCTACTGCTT GGCCAGGCGC GGGATGAGGT GCTGCGTGAG GAACTGGAGA TCGAACGCTT GCAAGATCAA CTGGCCAAGA TGAGCAGGCT GCGCCTGGAT GTGCGTGAAC TGCAACGGCC CGGGCCACTG GCTTTCACGC TACTGGTCGA GGGCATGCGT GAGACCCTGA CCACAGAGAA ACTGGCCGAT CGCATTGCGC GCATGGTCGC GGACCTTGAA AAAGCAGCGA GCAGGAAGGC ATGA
|
Protein sequence | MPSPPDIANA WFRMRGWKPF AFQRQAWAAV GRGESGLLHA STGAGKTYAL WLAALRTFAK PGAGRQPAPL QVLWITPMRA LAADTARALQ APLDDLGLNW SVGVRSGDTG SAERARQARR LPSTLITTPE SLTLLLTRAK ACDDFASLRM VVVDEWHELL GNKRGVQLQL ALARLRRWHP QLVTWGLSAT LGNLPHALEV LVPKGGRLIK GRQDKRLVVD TLLPEAIERF PWAGHMGLKM LAQVARELDT SASSLVFTNT RAQAELWYQA LLDARPDWAG QIALHHASLA RATRDWVELS LKQGTLKAVI CTSSLDLGVD FLPVERVLQI GSAKGVARLM QRAGRSGHAP GRQSRVTLVP THSLELVEAA AARSALTAGH IEARRSPRLC MDVLVQHLVS MALGCGFRPA ELLTEVRSTW AFCDLRDSQW QWALDFVCHG GSSLSAYPDY QRVEAHSDGV WRVVSERLAR RHRMGIGTIV SDASLQLKYW SKGGGGKHLG SVEEAFIARL RPGDTLVFAG RILELVRVEN MTAYVRRSNA RKAAVARWNG GRMPLSSELA DALVEKLDAA ARGHFDDPEM RTVRPLLALQ GQWSALPTTQ TLLAETLVTR QGSHLFVYPF AGRMANLGLA NLIAWRVSRN QPLSVSIAVS DYGFELLSPT PVDWARYLPA AMSTEHLLED VLASLNASEM ALRRFREIAQ ISGLVFGGYP GAQKSTRQIQ ASSGLFYEVF RKHDADNLLL GQARDEVLRE ELEIERLQDQ LAKMSRLRLD VRELQRPGPL AFTLLVEGMR ETLTTEKLAD RIARMVADLE KAASRKA
|
| |