| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1105 |
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| Symbol | |
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| ID | 6110024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1225268 |
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| End bp | 1226119 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620870 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001747979 |
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| Protein GI | 170720291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTG CTCTACGCGA ACCTACGCTG TCCAGCCAGT GCCTGGCCGA ATTCCTCGGC
ACGGCGCTGC TCATCTTTTT CGGCACAGGA TGCGTCGCCG CCCTCAAGGT CGCGGGCGCC
AGCTTTGGAC TGTGGGAAAT CAGCATCATC TGGGGCGTCG GCGTGAGCAT GGCGATCTAC
CTCACCGCCG GTGTATCCGG TGCGCACCTG AACCCGGCCG TCAGCATCGC CCTTACCCTG
TTCGCAAGCT TCGACAAACG CAAACTGCCG TTCTACATGC TGGCCCAGGT TTGCGGCGCC
TTCTGCGGCG CGGCGCTGGT CTACACCCTC TATAGCAGCC TGTTCTTCGA TTTCGAACAA
GCCCACGCCA TGCTGCGCGG CAGCAGCGAA AGCCTGGAAC TGGCGGCGGT GTTCTCCACC
TACCCGCACC CTTCGCTTTC CATCGCACAG GCGTTCCTGG TCGAAGTGGT GATCACTGCA
ATCTTGATGG CGGTCATCAT GGCCCTGACC GACGACAACA ACGGCCTGCC CCGTGGTGCG
ATGGCACCGC TGCTGATCGG CCTGTTGATC GCCGTGATCG GTAGCGCCAT GGGCCCGCTG
ACCGGCTTTG CGATGAACCC GGCCCGCGAT TTCGGGCCCA AACTGATGAC CTTCCTGGCC
GGCTGGGGCG AAATCGCCTT CACTGGCGGT CGGGACATCC CTTATTTCCT GGTTCCGGTG
TTCGCACCGA TCTTCGGCGC TTGCCTGGGT GCTGCGACCT ATCGTGGCTT GATCGCCCGC
AACCTGCCGA CGGCGCAAAG CGCGAACCCA GAGACAAACG GCAATCGCCA GGGCGATACT
CAAGCCAACT GA
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| Protein sequence | MTTALREPTL SSQCLAEFLG TALLIFFGTG CVAALKVAGA SFGLWEISII WGVGVSMAIY
LTAGVSGAHL NPAVSIALTL FASFDKRKLP FYMLAQVCGA FCGAALVYTL YSSLFFDFEQ
AHAMLRGSSE SLELAAVFST YPHPSLSIAQ AFLVEVVITA ILMAVIMALT DDNNGLPRGA
MAPLLIGLLI AVIGSAMGPL TGFAMNPARD FGPKLMTFLA GWGEIAFTGG RDIPYFLVPV
FAPIFGACLG AATYRGLIAR NLPTAQSANP ETNGNRQGDT QAN
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