| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1102 |
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| Symbol | glpD |
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| ID | 6110021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1221155 |
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| End bp | 1222684 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620867 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001747976 |
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| Protein GI | 170720288 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.889292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGC CCGTTTCGTC CCAGCCCCTA CTTGCCGATT GCTATGATCT TGCCGTGATC
GGCGGTGGCA TCAATGGCGT GGGCATTGCT GCCGACGCCG CCGGGCGTGG CCTCAAGGTC
TTCCTCTGCG AAAAGGACGA CTTGGCCCAG CACACCTCCT CGGCCAGCAG CAAGCTGATC
CATGGCGGCT TGCGCTACCT GGAACACTAT GAATTCCGCC TTGTACGCGA GGCTCTGGCC
GAGCGCGAAG TGCTATTGGC CAAGGCACCG CACATCGTCA AACCGATGCG TTTCGTGCTG
CCGCACCGTC CGCACCTGCG CCCGGCCTGG ATGATCCGTG CCGGCTTGTT CCTCTACGAC
CACCTGGGCA AGCGCAAGCG CCTGGGCGCG TCGCGCAGCC TGCGCTTTGG CCCGGGCTAC
CCGCTCAAGC CGGCCATCAC CCGCGGTTTC GAATATGCAG ACTGCGCGGT AGACGACGCC
CGCCTGGTGG TGCTCAATGC CATGGCTGCA CGCGAGCAAG GCGCGCACAT TCATACCCGC
ACCCGCTGCC TGCGCGCAGA ACGCGTCGAT GGCCTGTGGC AGGTAGAGCT GCAGCATGCC
GACGGCAGCC TGCAGACGAT TCGCGCCCGT GCCTTGGTCA ACGCCGCCGG TCCATGGGTC
GCCAAGTTCA TCAAGGATGA CCTCAAACTC GATGCACCAT ACGGCATACG ATTGATCCAG
GGCAGCCACC TCATCGTGCC GCGCCTGTAC GAGGGGGATC ACGCCTACAT CCTCCAGAAC
GAGGACCAAC GCATTGTCTT CTGCATCCCG TACCTGGACC GCTTCACCCT GATCGGCACC
ACCGATCGCG AATACAGCGG CGATCCGGCC AAGGTGGCGA TCACCGAGCA GGAAACCGAC
TATCTGCTCA AAGTGGTCAA CGCACATTTC AATCATCAGT TGAGCGCCAG CGATATCCTG
CACACCTACT CCGGCGTGCG TCCGCTGTGC AACGACGAAT CGGACAACCC GTCTGCAGTC
ACGCGTGACT ACACCCTCGC GCTGTCCGCA ACCCAAGGCG AGGCGCCGTT GCTGTCGGTG
TTTGGCGGCA AACTGACCAC ATACCGCAAA CTTGCCGAGT CGGCCATGGC AGAGCTCAAA
CCGTTCTTCA GCCAAATGGG CCAGAGCTGG ACTGCCAGTT CAGCGCTGCC CGGCGGTGAA
GGCATGAGCA CGCCCCAGAA CCTGGTCGCC GAGCTGCTCT CCCAGCATCA ATGGCTTGCA
CCGGATATCG CCAAGCGCTG GGCAGTGACC TACGGCAGCC GCACCTGGCA GCTGCTGAAG
GGCGTTAATG GCCCTGACGA TCTGGGCCAG GCGATCGGCG GTGGCTTGTT CACCCGTGAA
GTTGATTACC TGCGCGAAAC CGAGTGGGCC TTCAGTGCAC AGGACATACT CTGGCGGCGT
ACCAAACTGG GCTTGTTCAC CAGCGAGGGC GAGCAACGGG CACTGGCCGA TTACCTTGCG
CAAAGCGACG TTCGCAGCGA CGCCGCCTGA
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| Protein sequence | MSQPVSSQPL LADCYDLAVI GGGINGVGIA ADAAGRGLKV FLCEKDDLAQ HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGLFLYD
HLGKRKRLGA SRSLRFGPGY PLKPAITRGF EYADCAVDDA RLVVLNAMAA REQGAHIHTR
TRCLRAERVD GLWQVELQHA DGSLQTIRAR ALVNAAGPWV AKFIKDDLKL DAPYGIRLIQ
GSHLIVPRLY EGDHAYILQN EDQRIVFCIP YLDRFTLIGT TDREYSGDPA KVAITEQETD
YLLKVVNAHF NHQLSASDIL HTYSGVRPLC NDESDNPSAV TRDYTLALSA TQGEAPLLSV
FGGKLTTYRK LAESAMAELK PFFSQMGQSW TASSALPGGE GMSTPQNLVA ELLSQHQWLA
PDIAKRWAVT YGSRTWQLLK GVNGPDDLGQ AIGGGLFTRE VDYLRETEWA FSAQDILWRR
TKLGLFTSEG EQRALADYLA QSDVRSDAA
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