| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1097 |
|---|
| Symbol | |
|---|
| ID | 6110016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1213442 |
|---|
| End bp | 1214176 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641620862 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001747971 |
|---|
| Protein GI | 170720283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA TCAAGAACGT CAACAAGTGG TACGGCGACT TCCAGGTACT GACCGACTGC
AGCACCGAGG TCAAGAAAGG TGAAGTGGTA GTGGTATGCG GCCCCTCGGG CTCGGGTAAA
TCAACGCTGA TCAAGTGCGT AAATGCCTTG GAACCGTTCC AGAAAGGTGA CGTCGTGGTC
GATGGCACCT CGATTGCCGA CCCCAAGACC AACCTGCCCA AGTTGCGTTC GCGGGTCGGT
ATGGTGTTCC AGCACTTCGA GCTGTTCCCG CACCTGACCA TCACCGAGAA CCTGACCATC
GCCCAGCGCA AGGTACTGGG CCGCAGCGAA GCAGAGGCCA CCAAGAAGGG CCTGGCCTTG
CTCGAGCGGG TTGGTCTGAG CGCCCATGCC AAGAAGCACC CCGGCCAGCT CTCAGGTGGC
CAGCAGCAAC GTGTGGCGAT CGCCCGCGCC CTGGCCATGG ACCCGATTGT CATGCTGTTC
GACGAACCGA CCTCGGCGCT GGACCCGGAA ATGGTCAGCG AGGTGCTGGA TGTAATGGTG
CAATTGGCCA ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAGATGGG CTTTGCCCGC
AAGGTCGCCA ACCGGGTCAT CTTCATGGAC AAGGGCAGCA TCATCGAAGA CTGCACCAAG
GAAGAGTTCT TCGGTGACCA AGGTGCCCGC GACCAACGCA CCCAGCACTT CCTCAGCAAG
ATCCTGCAAC ACTAA
|
|---|
| Protein sequence | MISIKNVNKW YGDFQVLTDC STEVKKGEVV VVCGPSGSGK STLIKCVNAL EPFQKGDVVV
DGTSIADPKT NLPKLRSRVG MVFQHFELFP HLTITENLTI AQRKVLGRSE AEATKKGLAL
LERVGLSAHA KKHPGQLSGG QQQRVAIARA LAMDPIVMLF DEPTSALDPE MVSEVLDVMV
QLANEGMTMM CVTHEMGFAR KVANRVIFMD KGSIIEDCTK EEFFGDQGAR DQRTQHFLSK
ILQH
|
|---|
| |