Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1095 |
Symbol | |
ID | 6110014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1210143 |
End bp | 1211471 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620860 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001747969 |
Protein GI | 170720281 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAG CGCCTCTAAC CGTCCTGATC GTCGAAGACG ACCCGCATGT GCTGCTCGGC TGCCAGCAGG CGCTGGCCCT GGAAGACATC GCCTGCGAGG GTGTCGGTAG CGCCGAACAG GCGCTGGAAC GGATCGGTGA TGACTTCGCC GGTATCGTCG TCAGTGACAT CCGCCTGCCG GGCATCGACG GCCTGGAACT GCTCAACCGC CTCAAGGCGC GCGACCGCAG CCTGCCGGTG GTACTGATTA CCGGCCATGG CGATATCGAC ATGGCCGTCG GCGCCATGCG CAATGGTGCC TACGACTTCA TGGAGAAACC CTTTTCGCCG GAACGCCTGG TCGACGTGGT GCGCCGCGCA CTCGAACAGC GCGGGCTATC GCGCGAAGTG CTGGCCCTGC GCCGCCAGCT GGCCGAACAG AGCAGCCTGG AGGGCCGCAT CATCGGCCGC TCGCCTGCCA TGGAGCAACT GCGTGAGCTG ATTGCCAACG TTGCCGACAC CTCGGCAAAC GTGCTGATCG AAGGCGAGAC CGGCACTGGC AAAGAGCTGG TCGCCCGTTG CCTGCACGAT TTCAGCCGGC GCCAGGGCCA GCCTTTTGTG GCGCTCAATT GTGGCGGCCT GCCGGAAAAC CTGTTCGAAA GCGAGATCTT CGGCCACGAG GCCAATGCTT TCACCGGCGC GGGCAAGCGT CGTATCGGCA AGATCGAGCA CGCCAACGGC GGTACCCTGT TCCTCGATGA AGTCGAGAGC ATGCCGATCA ACCTGCAGAT CAAACTGCTG CGGGTATTAC AGGAGCGCAC CCTGGAACGC CTGGGCTCAA ACCAGAGCAT TGCAGTGGAC TGCCGCGTGA TCGCTGCGAC CAAGGCCGAC CTCGATTCGC TTGGCAAAAG CGGGCAGTTT CGCAGCGACT TGTACTACCG CCTTAACGTG GTGACCCTGG AGTTACCACC GTTGCGCGAA CGCCGTGAAG ACGTCCTGCA GCTGTTCGAA CACTTCCTGC AGCAATCGGC ACTACGCTTC GACCGTGAAG TGCCGACACT CGACAGCCAG ACACTGTCGC GCCTGATGGC CCATGACTGG CCCGGCAATG TGCGTGAACT GCGCAACGTT GCAGAGCGCT ATGCCCTGGG CCTGCCAGCG TTCAAGAAAG GCCCGAGCGG TGGCGCCAGC CAAGGGCTGG GCTTTGCCGA AGCGGTGGAG GCGTTCGAGC GCAACCTGCT CAGCGACGCC CTGCAACGCA CGGGCGGCAA CCTGAGCCAG GCCAGCCAGG AGCTGGGCAT GGCCAAGACC ACGCTGTTCG ACAAAGTGAA AAAATACGGG CTGGGCTGA
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Protein sequence | MNQAPLTVLI VEDDPHVLLG CQQALALEDI ACEGVGSAEQ ALERIGDDFA GIVVSDIRLP GIDGLELLNR LKARDRSLPV VLITGHGDID MAVGAMRNGA YDFMEKPFSP ERLVDVVRRA LEQRGLSREV LALRRQLAEQ SSLEGRIIGR SPAMEQLREL IANVADTSAN VLIEGETGTG KELVARCLHD FSRRQGQPFV ALNCGGLPEN LFESEIFGHE ANAFTGAGKR RIGKIEHANG GTLFLDEVES MPINLQIKLL RVLQERTLER LGSNQSIAVD CRVIAATKAD LDSLGKSGQF RSDLYYRLNV VTLELPPLRE RREDVLQLFE HFLQQSALRF DREVPTLDSQ TLSRLMAHDW PGNVRELRNV AERYALGLPA FKKGPSGGAS QGLGFAEAVE AFERNLLSDA LQRTGGNLSQ ASQELGMAKT TLFDKVKKYG LG
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