| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1089 |
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| Symbol | |
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| ID | 6110008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1199962 |
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| End bp | 1201380 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620854 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001747963 |
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| Protein GI | 170720275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.501177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCG GCAACCACCC TGCCCATGGC GAGACCGCAC AAGGCGGCCC GCTCAAGCGT
GAACTGGGCG AACGGCACAT TCGTCTGATG GCGCTGGGCG CCTGTATCGG CGTCGGTCTT
TTCCTCGGTT CGGCCAAAGC CATTGAGATG GCCGGCCCCG CGATCATGCT TTCCTACATC
ATCGGTGGCC TGGCGATCCT GGTGATCATG CGTGCCCTCG GCGAGATGGC CGTGCACAAC
CCTGTCGCCG GGTCATTCAG CCGCTATGCC CAGGACTACC TTGGCCCGTT GGCGGGTTTT
CTGACCGGTT GGAACTACTG GTTCCTGTGG CTGGTGACCT GCGTCGCGGA AATCACCGCC
GTGGCTATCT ACATGGGCAT CTGGTTCCCG GACGTGCCAC GCTGGATCTG GGCGCTGGCG
GCGCTGGGCA GCATGGGCGC GGTGAACCTG GTTGCGGTCA AGGCTTTCGG CGAGTTCGAA
TTCTGGTTTG CCCTGATCAA GATCGTCACC ATCATCGCCA TGGTCCTGGG CGGCATCGGC
ATCATCGCCT TCGGCCTGGG CAACGACGGT GTGGCAGTCG GTATCTCCAA CCTATGGAGC
AATGGCGGGT TCATGCCCAA TGGCGTGACC GGTGTGCTGA TGTCGCTGCA GATGGTGATG
TTCGCCTACC TGGGCGTGGA AATGATCGGC CTGACTGCCG GCGAAGCCCG CAACCCGCAA
AAAACCATCC CGCAGGCCAT TGGCTCGGTG TTCTGGCGCA TTCTGCTGTT CTACGTAGGT
GCCTTGTTCG TGATCCTGTC GATCTACCCG TGGAATGAAA TCGGCAGCCA GGGTAGCCCG
TTCGTCATGA CCTTCGAGCG CCTGGGTATC AAGACTGCCG CCGGCATCAT CAATTTCGTG
GTGATCACTG CCGCCCTGTC GTCCTGCAAC GGCGGTATCT TCAGCACCGG GCGCATGCTC
TACAGCCTGG CGCAAAATGG CCAGGCGCCG GCCGTCTTTG CCCGTACTTC GAAAAACGGT
GTGCCACGCA ATGCGCTGCT GCTGTCCATC GGTGCCTTGC TGCTGGGTGT GCTGGCCAAC
TACCTGGTGC CAGAGAAGGT GTTTGTCTGG GTGACGTCGA TCGCTACCTT CGGCGCGATC
TGGACCTGGG TGATGATCCT GCTGGCGCAG CTCAAGTTCC GCGCCGGGCT GTCGGCCACC
GAGCGCAAGG GCTTGAAGTA CCGCATGTGG CTGTGGCCGC TCAGCTCCTA CCTGGCGCTG
GGCTTCCTGG TGCTGGTGGT TGGCTTGATG GCGTACTTCG AGGATACCCG TGTGGCTCTG
TATATTGGCC CGGCGTTCCT GGTGCTGCTG ACGGTGCTGT ACTACGCGTT CCGCCTGGCG
CCGAAAGAAC TACAGGGTGT AGCCGGTAAC GCTTCCTGA
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| Protein sequence | MPVGNHPAHG ETAQGGPLKR ELGERHIRLM ALGACIGVGL FLGSAKAIEM AGPAIMLSYI
IGGLAILVIM RALGEMAVHN PVAGSFSRYA QDYLGPLAGF LTGWNYWFLW LVTCVAEITA
VAIYMGIWFP DVPRWIWALA ALGSMGAVNL VAVKAFGEFE FWFALIKIVT IIAMVLGGIG
IIAFGLGNDG VAVGISNLWS NGGFMPNGVT GVLMSLQMVM FAYLGVEMIG LTAGEARNPQ
KTIPQAIGSV FWRILLFYVG ALFVILSIYP WNEIGSQGSP FVMTFERLGI KTAAGIINFV
VITAALSSCN GGIFSTGRML YSLAQNGQAP AVFARTSKNG VPRNALLLSI GALLLGVLAN
YLVPEKVFVW VTSIATFGAI WTWVMILLAQ LKFRAGLSAT ERKGLKYRMW LWPLSSYLAL
GFLVLVVGLM AYFEDTRVAL YIGPAFLVLL TVLYYAFRLA PKELQGVAGN AS
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