| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1088 |
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| Symbol | |
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| ID | 6110007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1196431 |
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| End bp | 1199568 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620853 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_001747962 |
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| Protein GI | 170720274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC TGTGGCAATC GGAACCATCC AGAACGGAAG CACCCGAAAC ACCTCTGGCC
GACACGCCGC AGCCAAAGTC CCCACGTCAG CGTCGGCTTT GGTGGCGGCT GATCCTGCTG
ATCCTGCTGG TGGCGATAAT CGCCATCGGC TTTGCCGCCT ATGACGAGTT CCGTACGTCC
GACCTGCAGT CCCGCGAGTT CAGCAAGCTG GCAAGCACCC TTACCTATTC ACTGCAGCCG
GGGCCCAGTG ACTCCATCGT CTACCCTGGC GAGGGACCGT TCGACAAACG CCTGGGCTAT
AGCGCGCTGG GCGAGTTCCT GCCGCGCCTG CTCAAGCGCG ACTACCTGAT CAGCGAGCAG
GTAAGGTTTT CGCCTGCCTT GATGAACTAC GTGGATCACG GCCTGTTCGC GCCCTACATC
GAGAAAATCC AGGCCGGATT GTCGATCACC GATTGCCGCG GCGACACGCT GTACCAGTAC
AACTATCCGC AATATCTGTA TCCGAACTTC GCCGCAATCC CTCCGGTGAT GGTCAACAGC
CTGCTGTTCA TCGAAAACCG CGACCTGCTG GACCCGAAGG ATCCGAAAAA CAACCCGGCA
GTCGATTGGC CGCGCTTCGC CAAGGCCGCC TACAGCCAGG TGGCCAAATA CCTGGCCTTG
CCCGGCCAGT CCGCCGGTGG CAGCACGCTG GCCACGCAGC TGGAGAAATA CCGCCATTCA
CCGGACGGCC TGACTGTTTC CGGTACCGAA AAGATCCGCC AGATGATTTC CGCCAGCGTG
CGCGCCTACC AGGGCGGGCC AGATACCACC GAGGCACGCC AGCGCATCGT GCGCGACTAC
CTCAACAGCG TGCCGCTGTC GGCGGTGCCC GGCCATGGTG AAGTGCATGG CATGGCCGAA
GGCCTGCGTG TGTGGTACGG CGCCGATTTC GACCAGGTCA ACCAGGCCCT CACCTCGACC
GCGACAGACC CCGAAAGCAT GGCCGCACGT GGTTTGGCAT TGCGCCAAGT GCTGTCGTTG
ATGATCGCCC AGCGCCGCCC CTCGCATTAT CTGACCAAGG GCCGCGTCGA ACTGGCCGAG
CTCACTGATT CGCACATCCG CGTGCTCGCT GCCAACGGCA TCATCGAGCG CGCCCTGGCC
GACGCGGCGT TGGCCAGCAA GGCGCTGTAC CGCGACTGGG TGGCACAGCC AACCATCGTT
CCGATCATCA CCAACAAAGG CATCAGCCTG GCCCGCAACC GCCTGTCAGG CATGCTCAAC
CGCCCGCTGT ATGACCTGGA CCGCCTCGAC CTCTCGGCAA CGAGCACCTT GCAGGCCGAT
CTTCAGCTTC AGGTCAGCCA GTACCTGAAG AACCTCTCCG ACCCTGAATT CGCTGCGCAG
ATCGGCCTGA TCGGTGAGCG CCTGCTGACC AGCAAGACCA CCGACCAGGT GCGCTACAGC
TTCACCTTGT TCGAACGCAC CGCCGATGGC TCAAGGGTGC GGGTGCAGAC TGACAGCACC
GACCAGCCCT TCGACATCAA CGAAGGCAGC AAGCTTGAGC TGGGCTCAAC GGCCAAGCTG
CGAGTGCTCA CCACCTATCT GCAGATCATC GCCGAACTGC ACGACAAGTA CGCCGGCATG
CCAGCCGCAG AGCTGAAGAA GGTCGAGGTC GCCGAGCTCG ATCGCATCAC CCAATGGTCA
CTGGAATGGC TGGCGCTGAA CAGCAAGAAC CAGAGCCTGG ATGCCATGCT CGACGCAGCC
CTGGAGCGCA AGTACTCGGC CAATACCGGC GAAGCATTCT TCACCGGCGG CGGCATGCAC
GTGTTCAACA ACTTCCGCAA GGAGGACAAC AGCCGCAACC CGACCCTCAA GGAAGCCCTG
CGCGAGTCGA TAAACCTGCC CTTCATTCGC CTGATGCGCG ACGTGGTGCG CTATGTGACC
TACCAGCAGC CATTCAACCG CGTGCCGCTG CTCAAGGACG ATTCGGACCC GCGCCGCCAG
GAGTACCTGG CACGTTTTGC CGACAAGGAA GGCACCAGCT ACCTGATGCG CTTCTGGCGG
AAGTACCAGC GCAAAACCTC GCAGCAACGC CTGGATACCT TCCTCGACAG CATGCGCGTC
ACACCGCAGC GCCTGGCCGC AGTTCACCGC TATCTGTTCC CGGCAGCTGG CCAGGAAACC
TTCAATGCAT TTGTCCGCGC GCACATCAAG GAAGACAAGA TCGCCCTGAG CAGACTTACC
GATGGCCGTC TGGCAGAGAT GTACGAGGCC TACGGCCCAG GCAAATATGA CCTGCCTGAT
CAAGGCTATA TCGCCAAGGT TCACCCGCTG GACCTGTGGC TGCTCGGCTA CCTGCTGAAG
AACCCGAGCG CCTCACTCAC AGAGATGGTC AATGCCAGCC GCTTCGAGCG TCAGGAAGTC
TATGGCTGGC TGTTCAAGAG CCGCCACCAG GGTGCCCGGG ACAGCCGTAT CCGCACCATG
GTGGAAATCG AAGCCTTCCT CGATATCCAC CAGCGCTGGA AGAGCGTGGG TTACCCCTTC
GATCACCTGG TGCCGTCGCT GGCCACCGCC ATCGGCAGCT CCGGCGACCG TCCTGCGGCT
CTTTCCGAAC TGGTCGGCAT CATTCAGAAC GACGGTGTGC GCCTGCCCAC GCTGCGCATC
GATACGCTGC ACTTCGCCGC CGATACGCCC TACGAAACCA GGCTGAACAG CGACCCCGAC
CGTGGCCAGC GAATTCTTCC GGTAGCAGTG GCCCGGGCAC TCAAAGGTGC CATGTCGCAA
GTGGTCGACG CAGGTACGGC GCGGCGTATT TCCGGCAGCT TCAAGCTGCA GGACGGCACC
CCGCTGGTGA TGGGCGGCAA GACCGGCACA GGCGACAACC GCATCGAAAG CTTCGGCGCA
GGTGGCCGGT TGATCGGCTC GCGCTCGCTG AACCGCACCG CCACCTTCGT GTTCTTCCTC
GGCGACAACC ACTTCGGCAC GCTGACCGCC TTCGTGCCCG GGCGCTCCGC GGAGGCGTTC
AAGTTCACCT CGGCGCTGCC TGTGCAGGTG CTCAAGGGGA TGGCGCCCAT CCTCATGCCG
TACCTTGAAC CTGGCAATCC GAACGCGTGC AAACCGCCGC AGGTTGCGAT GCTCCCAAGT
GACCCATCTA AAATTTAA
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| Protein sequence | MGALWQSEPS RTEAPETPLA DTPQPKSPRQ RRLWWRLILL ILLVAIIAIG FAAYDEFRTS
DLQSREFSKL ASTLTYSLQP GPSDSIVYPG EGPFDKRLGY SALGEFLPRL LKRDYLISEQ
VRFSPALMNY VDHGLFAPYI EKIQAGLSIT DCRGDTLYQY NYPQYLYPNF AAIPPVMVNS
LLFIENRDLL DPKDPKNNPA VDWPRFAKAA YSQVAKYLAL PGQSAGGSTL ATQLEKYRHS
PDGLTVSGTE KIRQMISASV RAYQGGPDTT EARQRIVRDY LNSVPLSAVP GHGEVHGMAE
GLRVWYGADF DQVNQALTST ATDPESMAAR GLALRQVLSL MIAQRRPSHY LTKGRVELAE
LTDSHIRVLA ANGIIERALA DAALASKALY RDWVAQPTIV PIITNKGISL ARNRLSGMLN
RPLYDLDRLD LSATSTLQAD LQLQVSQYLK NLSDPEFAAQ IGLIGERLLT SKTTDQVRYS
FTLFERTADG SRVRVQTDST DQPFDINEGS KLELGSTAKL RVLTTYLQII AELHDKYAGM
PAAELKKVEV AELDRITQWS LEWLALNSKN QSLDAMLDAA LERKYSANTG EAFFTGGGMH
VFNNFRKEDN SRNPTLKEAL RESINLPFIR LMRDVVRYVT YQQPFNRVPL LKDDSDPRRQ
EYLARFADKE GTSYLMRFWR KYQRKTSQQR LDTFLDSMRV TPQRLAAVHR YLFPAAGQET
FNAFVRAHIK EDKIALSRLT DGRLAEMYEA YGPGKYDLPD QGYIAKVHPL DLWLLGYLLK
NPSASLTEMV NASRFERQEV YGWLFKSRHQ GARDSRIRTM VEIEAFLDIH QRWKSVGYPF
DHLVPSLATA IGSSGDRPAA LSELVGIIQN DGVRLPTLRI DTLHFAADTP YETRLNSDPD
RGQRILPVAV ARALKGAMSQ VVDAGTARRI SGSFKLQDGT PLVMGGKTGT GDNRIESFGA
GGRLIGSRSL NRTATFVFFL GDNHFGTLTA FVPGRSAEAF KFTSALPVQV LKGMAPILMP
YLEPGNPNAC KPPQVAMLPS DPSKI
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