| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1081 |
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| Symbol | |
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| ID | 6110000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1187813 |
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| End bp | 1190224 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620846 |
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| Product | PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein |
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| Protein accession | YP_001747955 |
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| Protein GI | 170720267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG ACGGTGCCAA GAATGGAAGC CGCTGGCTAC CGCGCCTGAT GGGCGTACTG
CTGTTGCTGA TGGGCCTGGC CTTGCTGGCG GGCGGCATCA AGCTCAGCCA GCTCGGCGGG
TCGCTGTATT ACCTGATTGC CGGTATCGGC TTTGCCGTTT CGGGCGCACT GCTGCTGGCT
CAGCGCCGAC TTGCCCTGGG CCTGTACGGC CTTGTGCTGC TGGGCAGCAC GGTATGGGCA
CTGCTGGAGG TGGGCCTGGA CTGGTGGCAA CTGGTGCCGC GCCTGGCCAT CTGGTTCGCC
ATTGGCGTGG TACTGCTGCT GCCGTGGGCA CGCCGCCCGC TGACCGGCCC GGCCAACAAG
GCCAATACCG CCCTGCTCAG CCTTGCCGTG CTCGCCTCTG GCGCTTGCGC GCTGGGCAGC
CAGTTCACCC ACCCGGGCGA AGTGTTTGGC GAACTGGGCC GCGACAACAG CGAAATGGGC
AGTGCCGCAC CCGCCATGCC CGACGGCGAC TGGCAAGCCT ATGGCCGCAC CGAGCATGGT
GACCGTTATT CGCCGCTGCG CCAGATCACC CCGCAGAATG CCTACCGCCT GGAAGAAGCC
TGGCGCATCC GCACCGGTGA CCTGCCAACG GACAACGACC CGGTCGAGTT GACCAACGAA
AACACCCCGC TGAAGGCCAA CGGCATGCTC TACGCCTGCA CCGCCCACAG CAAGGTGCTG
GCCCTGGACC CGGACACCGG TGCCGAGATC TGGCGCTACG ACCCGCAGAT CAAGACCCCG
GTGGGTACGT TCAAGGGCTT CGCCCACATG ACCTGCCGCG GCGTTTCGTA CTATGACGAG
AACAGCTACG TCAGCCGCGA TGGCAGCCCG GCGCCGAAGG TATCCGACGC AGGCCAAGCT
GTCGCCCAAG CCTGCCCGCG CCGCCTCTAC CTGCCGACCG CAGACGCCCG CCTGATCGCC
ATCAATGCCG ACAACGGCAA AGTCTGCGAA GGCTTCGCCA ACCAGGGCGC GATCGACCTG
ACTACCGGTA TTGGCCCGTT CACAGCCGGC GGTTATTACT CCACCTCGCC GGTGGCGGTC
ACCCGCAGCC TGGTGATCAT CGGCGGCCAT GTCACCGACA ACGAGTCGAC CAACGAGCCT
TCCGGCGTGA TCCGCGCCTA TGACGTGCAC GATGGCCACC TGGTCTGGAA CTGGGATAGC
AACAACCCCG ATGACACCCA GCCACTGGCC CCGGGCAAGA CCTACAGCCG CAACTCGGCC
AACATGTGGT CGTTGGCCAG TGTCGATGAA GACCTGGGCA TGGTCTACCT GCCGCTGGGC
AACCAGACAC CCGACCAGTA TGGCGCCAAC CGTACCCCGG GTGCGGAGAA GTACAGCGCT
GGCGTGGTCG CACTGGACCT TGCCACCGGC AAGGCGCGCT GGAACTACCA GTTCACCCAC
CACGACCTGT GGGACATGGA CGTCGGCAGC CAGCCAACCT TGGTTCACCT GAAGACCAAG
GAAGGCGTCA AGCCTGCGAT CATCGTACCG ACAAAGCAGG GCAGCCTGTA CGTGCTCGAC
CGCCGCGACG GTAGCCCCAT CGTGCCGATC CGTGAGATCC CGGTACCGCA AGGTGCGGTC
AAGGGTGACC ACACTGCACC GACCCAGGCC CGCTCCGACC TCAACCTGCT CGGCCCGGAC
CTGACCGAAC AGGCCATGTG GGGTGCCACA CCGTTCGACC AGATGCTGTG CCGCATCCAG
TTCCGCGAAC TGCGCTATGA GGGCCAGTAC ACTCCACCGT CCGAGCAAGG CTCGCTGGTC
TACCCGGGCA ACGTAGGTGT GTTCAACTGG GGCAGCGTCT CGGTCGACCC GGTGCGCCAA
CTGCTGTTCA CCTCGCCCAA CTACATGGCC TTCGTGTCGA AGATGGTACC GCGCGAACAG
GTTGCCGCCG GCAGCAAGCG CGAAAGCGAA ACCAGCGGCG TGCAGCCCAA CACTGGCGCG
CCTTACGCCG TGATCATGCA CCCGTTCATG TCGCCGCTGG GCGTGCCGTG CCAGGCACCG
GCCTGGGGTT ACGTGGCGGC CATCGACCTG TTCACCAACA AAGTGGTGTG GAAGCGCAAG
AACGGCACCA CCCGTGACAG CACTCCGATA CCGATCGGCA TGCCGGTAGG TGTGCCGAGC
ATGGGCGGCT CGATCGTCAC TGCTGGTGGT GTCGGCTTCC TCAGCGGCAC TCTGGACCAG
TACCTGCGCG CTTATGACGT GAACAACGGC AAGGAACTGT GGAAAGCCCG CCTGCCAGCG
GGTGGCCAGG CCACGCCGAT GACCTACACC GGCAAGGACG GCAAGCAGTA CGTGCTGATC
GTCGCCGGCG GCCACGGTTC GCTGGGCACC AAAATGGGCG ATTACATCAT CGCTTACAAA
CTCGCCGACT AA
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| Protein sequence | MSTDGAKNGS RWLPRLMGVL LLLMGLALLA GGIKLSQLGG SLYYLIAGIG FAVSGALLLA
QRRLALGLYG LVLLGSTVWA LLEVGLDWWQ LVPRLAIWFA IGVVLLLPWA RRPLTGPANK
ANTALLSLAV LASGACALGS QFTHPGEVFG ELGRDNSEMG SAAPAMPDGD WQAYGRTEHG
DRYSPLRQIT PQNAYRLEEA WRIRTGDLPT DNDPVELTNE NTPLKANGML YACTAHSKVL
ALDPDTGAEI WRYDPQIKTP VGTFKGFAHM TCRGVSYYDE NSYVSRDGSP APKVSDAGQA
VAQACPRRLY LPTADARLIA INADNGKVCE GFANQGAIDL TTGIGPFTAG GYYSTSPVAV
TRSLVIIGGH VTDNESTNEP SGVIRAYDVH DGHLVWNWDS NNPDDTQPLA PGKTYSRNSA
NMWSLASVDE DLGMVYLPLG NQTPDQYGAN RTPGAEKYSA GVVALDLATG KARWNYQFTH
HDLWDMDVGS QPTLVHLKTK EGVKPAIIVP TKQGSLYVLD RRDGSPIVPI REIPVPQGAV
KGDHTAPTQA RSDLNLLGPD LTEQAMWGAT PFDQMLCRIQ FRELRYEGQY TPPSEQGSLV
YPGNVGVFNW GSVSVDPVRQ LLFTSPNYMA FVSKMVPREQ VAAGSKRESE TSGVQPNTGA
PYAVIMHPFM SPLGVPCQAP AWGYVAAIDL FTNKVVWKRK NGTTRDSTPI PIGMPVGVPS
MGGSIVTAGG VGFLSGTLDQ YLRAYDVNNG KELWKARLPA GGQATPMTYT GKDGKQYVLI
VAGGHGSLGT KMGDYIIAYK LAD
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