| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1070 |
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| Symbol | |
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| ID | 6109989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1175241 |
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| End bp | 1176680 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620835 |
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| Product | protease Do |
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| Protein accession | YP_001747944 |
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| Protein GI | 170720256 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAC CACGCTTGAA ATCCTACTTA TCGATGTTCG CCGCCGTGCT GATGCTCGGC
CAGGTGCTGA GCGCCCAGGC CGAGGAGGCC CTGCCGGACT TCACCACCTT GGTCGAGCAG
GCCTCGCCGG CCGTCGTCAA CATCAGTACC AAGCAAAAGC TGCCTGACCG CCGTATTGCT
GCCGGTCAGA TGCCGGACCT CGAAGGCTTG CCGCCGATGT TCCGCGAGTT CTTCGAGCGC
AACATGCCGC AACAGCCGCG TTCGCCCCGT GGTGACCGCC AGCGCGAGGC CCAGTCGCTG
GGCTCAGGCT TCATCATTTC CAGTGACGGC TATGTGCTGA CCAACAATCA CGTGGTTGCC
GATGCCGACG AGATCATCGT CCGTCTGTCG GATCGCAGCG AACTGCAGGC CAAACTGGTC
GGCACCGACC CACGCACCGA CGTGGCCCTG CTCAAGGTCG ACGGCAAGAA CCTGCCCACC
GTCAAACTGG GCGACTCCGA GAAGCTCAAG GTAGGTGAGT GGGTACTGGC CATCGGTTCG
CCGTTCGGTT TCGATCATTC GGTGACCAAG GGTATCGTCA GTGCCAAGGG CCGCACCCTG
CCCAATGACA CCTACGTGCC CTTCATTCAG ACCGACGTGG CCATCAACCC GGGCAACTCC
GGCGGGCCGC TGTTCAACAT GAATGGCGAA GTAGTGGGTA TCAACTCGCA GATCTTCACC
CGTTCGGGTG GTTTCATGGG GCTGTCGTTC GCCATCCCGA TCGATGTCGC GATCGATGTC
TCCAACCAGT TGAAGAAGGA CGGCAAGGTC AGCCGCGGCT GGCTGGGCGT GGTCATTCAG
GAGGTCAACA AGGACCTGGC TGAATCCTTC GGCCTCGACA AGCCGGCCGG CGCCCTGGTG
GCGCAGGTGC TGGAAGATGG CCCAGCAGCC AAGAGCGGCC TGCAGGTGGG CGACGTGATC
CTGAGCATGA ACGGCCAGCC GATCGTCATG TCGGCCGACC TGCCGCATCT GGTAGGTACC
CTGAAGGCTG GCGCCAAGGC CAAGCTTGAG ATCATCCGTA ATGGCAAGCG CCAGAACCTG
GATGTGACCA TTGGTGCGAT GCCTGATGAC GATGCCGATA TCGGTACCGG TACGGGTGCC
GATGGCAGCG CAGAGCGCAG CAGCAACCGC CTGGGTGTTT CCGTCTCTGA CCTGACCGCC
GAGCAGAAGA AGTCGCTGGA GCTCAAGGGT GGCGTTGTCA TCAAGGAAGT CCAGGATGGC
CCGGCAGCCA TGATTGGCCT GCGTCCGGGT GACGTTATCA GCCACTTGAA CAACCAGGCG
ATCGCCTCGG CCAAGCAGTT CACCGAAATT GCCAAGGACC TGCCGAAGAA CCGTTCGGTC
TCCATGCGCG TGCTGCGCCA GGGCCGGGCG AGCTTCATCA CCTTCAAGCT TGCTGAATAA
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| Protein sequence | MSIPRLKSYL SMFAAVLMLG QVLSAQAEEA LPDFTTLVEQ ASPAVVNIST KQKLPDRRIA
AGQMPDLEGL PPMFREFFER NMPQQPRSPR GDRQREAQSL GSGFIISSDG YVLTNNHVVA
DADEIIVRLS DRSELQAKLV GTDPRTDVAL LKVDGKNLPT VKLGDSEKLK VGEWVLAIGS
PFGFDHSVTK GIVSAKGRTL PNDTYVPFIQ TDVAINPGNS GGPLFNMNGE VVGINSQIFT
RSGGFMGLSF AIPIDVAIDV SNQLKKDGKV SRGWLGVVIQ EVNKDLAESF GLDKPAGALV
AQVLEDGPAA KSGLQVGDVI LSMNGQPIVM SADLPHLVGT LKAGAKAKLE IIRNGKRQNL
DVTIGAMPDD DADIGTGTGA DGSAERSSNR LGVSVSDLTA EQKKSLELKG GVVIKEVQDG
PAAMIGLRPG DVISHLNNQA IASAKQFTEI AKDLPKNRSV SMRVLRQGRA SFITFKLAE
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