Gene PputW619_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1070 
Symbol 
ID6109989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1175241 
End bp1176680 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content62% 
IMG OID641620835 
Productprotease Do 
Protein accessionYP_001747944 
Protein GI170720256 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC CACGCTTGAA ATCCTACTTA TCGATGTTCG CCGCCGTGCT GATGCTCGGC 
CAGGTGCTGA GCGCCCAGGC CGAGGAGGCC CTGCCGGACT TCACCACCTT GGTCGAGCAG
GCCTCGCCGG CCGTCGTCAA CATCAGTACC AAGCAAAAGC TGCCTGACCG CCGTATTGCT
GCCGGTCAGA TGCCGGACCT CGAAGGCTTG CCGCCGATGT TCCGCGAGTT CTTCGAGCGC
AACATGCCGC AACAGCCGCG TTCGCCCCGT GGTGACCGCC AGCGCGAGGC CCAGTCGCTG
GGCTCAGGCT TCATCATTTC CAGTGACGGC TATGTGCTGA CCAACAATCA CGTGGTTGCC
GATGCCGACG AGATCATCGT CCGTCTGTCG GATCGCAGCG AACTGCAGGC CAAACTGGTC
GGCACCGACC CACGCACCGA CGTGGCCCTG CTCAAGGTCG ACGGCAAGAA CCTGCCCACC
GTCAAACTGG GCGACTCCGA GAAGCTCAAG GTAGGTGAGT GGGTACTGGC CATCGGTTCG
CCGTTCGGTT TCGATCATTC GGTGACCAAG GGTATCGTCA GTGCCAAGGG CCGCACCCTG
CCCAATGACA CCTACGTGCC CTTCATTCAG ACCGACGTGG CCATCAACCC GGGCAACTCC
GGCGGGCCGC TGTTCAACAT GAATGGCGAA GTAGTGGGTA TCAACTCGCA GATCTTCACC
CGTTCGGGTG GTTTCATGGG GCTGTCGTTC GCCATCCCGA TCGATGTCGC GATCGATGTC
TCCAACCAGT TGAAGAAGGA CGGCAAGGTC AGCCGCGGCT GGCTGGGCGT GGTCATTCAG
GAGGTCAACA AGGACCTGGC TGAATCCTTC GGCCTCGACA AGCCGGCCGG CGCCCTGGTG
GCGCAGGTGC TGGAAGATGG CCCAGCAGCC AAGAGCGGCC TGCAGGTGGG CGACGTGATC
CTGAGCATGA ACGGCCAGCC GATCGTCATG TCGGCCGACC TGCCGCATCT GGTAGGTACC
CTGAAGGCTG GCGCCAAGGC CAAGCTTGAG ATCATCCGTA ATGGCAAGCG CCAGAACCTG
GATGTGACCA TTGGTGCGAT GCCTGATGAC GATGCCGATA TCGGTACCGG TACGGGTGCC
GATGGCAGCG CAGAGCGCAG CAGCAACCGC CTGGGTGTTT CCGTCTCTGA CCTGACCGCC
GAGCAGAAGA AGTCGCTGGA GCTCAAGGGT GGCGTTGTCA TCAAGGAAGT CCAGGATGGC
CCGGCAGCCA TGATTGGCCT GCGTCCGGGT GACGTTATCA GCCACTTGAA CAACCAGGCG
ATCGCCTCGG CCAAGCAGTT CACCGAAATT GCCAAGGACC TGCCGAAGAA CCGTTCGGTC
TCCATGCGCG TGCTGCGCCA GGGCCGGGCG AGCTTCATCA CCTTCAAGCT TGCTGAATAA
 
Protein sequence
MSIPRLKSYL SMFAAVLMLG QVLSAQAEEA LPDFTTLVEQ ASPAVVNIST KQKLPDRRIA 
AGQMPDLEGL PPMFREFFER NMPQQPRSPR GDRQREAQSL GSGFIISSDG YVLTNNHVVA
DADEIIVRLS DRSELQAKLV GTDPRTDVAL LKVDGKNLPT VKLGDSEKLK VGEWVLAIGS
PFGFDHSVTK GIVSAKGRTL PNDTYVPFIQ TDVAINPGNS GGPLFNMNGE VVGINSQIFT
RSGGFMGLSF AIPIDVAIDV SNQLKKDGKV SRGWLGVVIQ EVNKDLAESF GLDKPAGALV
AQVLEDGPAA KSGLQVGDVI LSMNGQPIVM SADLPHLVGT LKAGAKAKLE IIRNGKRQNL
DVTIGAMPDD DADIGTGTGA DGSAERSSNR LGVSVSDLTA EQKKSLELKG GVVIKEVQDG
PAAMIGLRPG DVISHLNNQA IASAKQFTEI AKDLPKNRSV SMRVLRQGRA SFITFKLAE