Gene PputW619_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1068 
Symbol 
ID6109987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1173496 
End bp1174086 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID641620833 
Productanti sigma-E protein, RseA 
Protein accessionYP_001747942 
Protein GI170720254 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.497141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG AAGCTTTGCA GGAATCGCTG TCCGCGGTAA TGGATAACGA AGCGGACGAA 
CTGGAATTGC GACGGGTGCT GAGCGCCGTC GACGATGCCG AAACCCGTGC CACCTGGTCG
CGTTACCAGG TTGCCCGCGC AGCGATGCAC AAGGAGCTGT TGCTGCCGAA ACTGGATATC
GCCTCGGCGG TGTCTGCCGC CCTGGCTGAC GAAGCCGTAC CGGCCAAGGT CAAGCAAGGC
CCGTGGCGCA GTATTGGCCG CCTGGCCGTT GCCGCCTCGG TCACCGTTGC TGTGCTGGCT
GGCGTGCGCA TGTACAACCA GGACGAGATC ACCGGCGCTG AGCTGGCTGC GCAACAACCT
GCCCAGCAAG GCCTGAGCAT GCCACAAACT CAGGGCCCGG CTGTTTTGGC AGGCTATAGT
GAAAGCAGTG AGCAACCGAC CGGGCCGATG GCCAATGGCG TGCTGCAGAA CCAGGCTGGC
TGGGATCAGC GTCTGCCGGG GTACCTGCGT CAGCATGCGC AGGAATCCGC GCTCAAGGGT
ACTGAAACTG CCCTGCCGTA TGCCCGCGCC GCCAGCCTGG AAAACCGCTA A
 
Protein sequence
MSREALQESL SAVMDNEADE LELRRVLSAV DDAETRATWS RYQVARAAMH KELLLPKLDI 
ASAVSAALAD EAVPAKVKQG PWRSIGRLAV AASVTVAVLA GVRMYNQDEI TGAELAAQQP
AQQGLSMPQT QGPAVLAGYS ESSEQPTGPM ANGVLQNQAG WDQRLPGYLR QHAQESALKG
TETALPYARA ASLENR