| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1066 |
|---|
| Symbol | |
|---|
| ID | 6109985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1170843 |
|---|
| End bp | 1172447 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620831 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001747940 |
|---|
| Protein GI | 170720252 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000905222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC AATTCCAACA TGATGTCCTG GTGATCGGCA GCGGCGCAGC CGGTCTCAGC
CTGGCACTCA ACCTTCCCGC CCACCTGCGC ATCGCCGTAC TGAGCAAGGG CGACCTGGCC
AATGGCTCGA CCTTCTGGGC CCAAGGTGGC GTGGCCGCGG TGCTGGACGA CACCGATACC
GTGCAGTCCC ATGTCGAGGA CACACTCAAC GCCGGTGGCG GCCTTTGCCA CGAAGACGCC
GTGCGATTCA CCGTCGAGCA CAGCCGCGAA GCCATTGAGT GGCTGATCGA ACAGGGCGTG
CCCTTTACCC GCGATGAGCA CTCCAGCGTT GACGATGGCG GGTTCGAATT TCACCTGACC
CGTGAAGGCG GGCACAGCCA CCGACGCATC ATCCATGCTG CCGATGCCAC GGGCGCGGCC
ATTTTCACCA CGTTGCTTGA GCAAGCCCGC AAACGCCCTA ACATCGAACT GCTTGAGCAA
CGTGTAGCGG TCGACCTGAT TACCGAGCGG CGCCTGGGCT TGCCCGGCGA GCGATGCCTG
GGCGCCTATG TGCTGAACCG CAACAGTGGT GAGGTGGATA CCTTCGGAGC GCGCTTTACA
GTGCTTGCCA CCGGCGGTGC CGCCAAGGTC TACCTGTATA CCAGCAACCC CGATGGCGCC
TGCGGCGATG GCATCGCCAT GGCCTGGCGC GCCGGCTGTC GGGTTGCCAA TCTGGAATTC
AACCAGTTCC ATCCGACCTG CCTCTACCAT CCGCAGGCCA AGAGTTTCCT CATCACTGAA
GCCCTGCGCG GCGAAGGCGC CCTGCTGCGC CTGCCCAATG GTGAACGCTT CATGCCGCGC
TTCGACCCAC GCGAAGAACT CGCACCGCGC GACATCGTGG CCCGGGCCAT CGACCATGAG
ATGAAGCGCC TGGGTGTGGA CTGCGTCTAC CTGGACATCA CGCACAAGCC GGCTGACTTC
ATAAAAAGCC ATTTCCCGAC CGTCTATGAG CGCTGCCTGA CCTTCGGTAT CGACATCACC
CGCCAGCCGA TCCCGGTAGT GCCCGCCGCC CACTACACCT GTGGCGGGGT GGTGGTCGAC
GATCGCGGCC ATACCGACGT ACCGGGCCTG TACGCCATCG GCGAGACCAG CTTCACCGGC
CTGCACGGCG CCAATCGCAT GGCCAGCAAC TCGCTGCTCG AGTGTTTCGT CTACGGCCGT
TCCGCTGCCG CGGACATCGA GGCCCGTCTG GCGCAGATTG CCATGCCCAA AGCCCTGCCA
TGCTGGGATG CCAGCCAGGT CACCGACTCG GATGAGGATG TGATCATCGC GCACAACTGG
GACGAACTGC GGCGGTTCAT GTGGGACTAC GTGGGCATCG TGCGCACGAG CAAGCGCCTG
CAGCGTGCCG AGCATCGCGT GCGCCTGCTA CTGGACGAAA TCGACGAGTT CTACAGCAAC
TACAAGGTCA GCCGCGACCT GATCGAGCTG CGCAACCTGG CACAGGTGGC GGAGTTGATG
ATCCGCTCGG CGATGCAGCG CAAGGAAAGC CGCGGGTTGC ATTACACCCT GGATTACCCC
GGCATGTTGG CTGAGGCCAA GGACACCATA CTGAGTCCGG CCTGA
|
|---|
| Protein sequence | MSQQFQHDVL VIGSGAAGLS LALNLPAHLR IAVLSKGDLA NGSTFWAQGG VAAVLDDTDT
VQSHVEDTLN AGGGLCHEDA VRFTVEHSRE AIEWLIEQGV PFTRDEHSSV DDGGFEFHLT
REGGHSHRRI IHAADATGAA IFTTLLEQAR KRPNIELLEQ RVAVDLITER RLGLPGERCL
GAYVLNRNSG EVDTFGARFT VLATGGAAKV YLYTSNPDGA CGDGIAMAWR AGCRVANLEF
NQFHPTCLYH PQAKSFLITE ALRGEGALLR LPNGERFMPR FDPREELAPR DIVARAIDHE
MKRLGVDCVY LDITHKPADF IKSHFPTVYE RCLTFGIDIT RQPIPVVPAA HYTCGGVVVD
DRGHTDVPGL YAIGETSFTG LHGANRMASN SLLECFVYGR SAAADIEARL AQIAMPKALP
CWDASQVTDS DEDVIIAHNW DELRRFMWDY VGIVRTSKRL QRAEHRVRLL LDEIDEFYSN
YKVSRDLIEL RNLAQVAELM IRSAMQRKES RGLHYTLDYP GMLAEAKDTI LSPA
|
|---|
| |