| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1060 |
|---|
| Symbol | |
|---|
| ID | 6109979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1166097 |
|---|
| End bp | 1166768 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641620825 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001747934 |
|---|
| Protein GI | 170720246 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGC TGCTGGTCGA AGACCACGTA CAACTGGCCG AAAGCGTGGC CCAGGCCCTG
AAGAGCCATG GTTTGACCGT GGATGTGCTG CATGACGGCG TGGCCGCCGA TCTGGCCCTG
GCCAGCGAGG AGTATGCTGT TGCCGTGCTC GATGTGGGCC TGCCACGCAT GGACGGCTTT
GAAGTGCTGG CCCGCCTGCG CGGGCGCGGC AAGACCCTGC CGGTGCTGAT GCTGACTGCA
CGCAGCGATG TGAAGGACCG GGTGCATGGC CTGAACCTTG GCGCCGATGA TTATCTGGCG
AAACCCTTTG AGCTGACCGA ACTGGAAGCA CGGGTCAAGG CCTTGCTGCG GCGTAGCGTG
CTCGGTGGTG AGCGCCAGCA GCGCTGCGGC CCGCTGGTGT ATGACCTTGA TACCCGGCGG
TTCGCCCTGG GCGAGGACAA CCTGACCCTG ACCTCCCGTG AGCAGAGCGT ACTCGAGGCG
CTGATCGCAC GCCCCGGCCG AGTGATGAGC AAGGAGCAAT TGGCCGCCCA GGTCTTCGGC
CTGGACGAAG AGGCCAGCCC CGACGCCATC GAAATCTACA TCCACCGCCT GCGCAAGAAG
CTCGACGGCC AGTCGGTGGC CATTGTCACG TTCCGCGGCC TGGGCTACCT GCTCGAGCAC
CGTGATGCGT GA
|
|---|
| Protein sequence | MRVLLVEDHV QLAESVAQAL KSHGLTVDVL HDGVAADLAL ASEEYAVAVL DVGLPRMDGF
EVLARLRGRG KTLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELTELEA RVKALLRRSV
LGGERQQRCG PLVYDLDTRR FALGEDNLTL TSREQSVLEA LIARPGRVMS KEQLAAQVFG
LDEEASPDAI EIYIHRLRKK LDGQSVAIVT FRGLGYLLEH RDA
|
|---|
| |