| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1056 |
|---|
| Symbol | |
|---|
| ID | 6109975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1161488 |
|---|
| End bp | 1163002 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620821 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001747930 |
|---|
| Protein GI | 170720242 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT TGAGCTACCT GGGCCAGGGC TTCGGCGTCG CCCTGACCCC CTACAACCTG
GTTACCGCCC TTTCGGGCAC CCTCATCGGC ACCGTGGTCG GCCTGCTGCC GGGCCTGGGC
CCGATCAACG GCGTGGCGCT GCTGATCCCG ATCGCATTCG CCCTCGGCCT GCCCCCAGAG
TCGGCACTGA TCCTGTTGGC AGCGGTGTAC CTGGGCTGCG AATACGGCGG GCGGATTAGC
TCGATCCTGC TGAATATCCC GGGCGAGGCC TCGACCGTGA TGACCACCCT CGACGGCTAC
CCGATGGCCC GCAACGGCCT GGCTGGCGTT GCCCTGTCGC TGTCGGCGTG GAGTTCGTTC
ATTGGCGCAC TCATCGCCAC CTGCGGCATG GTGCTGTTCG CCCCGCTGCT GGCGAAATGG
GCGATTGCCT TCGGGCCGGC GGAGTACTTC GTGCTGATGG TGTTCGCTAT CGTTGCTTTG
GGCGGCATGG CCGGGGACAA ACCGCTGAAG ACCTTCATCG CCGCACTGAT CGGCCTGTTC
CTGTCAGCGG TCGGTATCGA CGCCAACAGC GGCGTATACC GCTTCACCGG TGATAGCGTG
CATCTGGCCG ACGGTATCCA GTTCGTGGTG CTGGTGCTGG GCCTGTTCTC GATCAGCGAA
ATCCTGCTGC TGCTGGAGAA GACTCATCAT GGGCATCAAG CGGTCAAGGC CACAGGGCGC
ATGCTGTTCA ACTTCAAGGA AGCGGCCTCG GTGTTCGTCG TCAACATCCG CTGCGGCCTG
CTTGGGTTCA TCATGGGCGT GCTGCCAGGT GCGGGAGCGA CCTTGGCCAG CGCCGTGGCC
TACATGAGCG AGAAGCGCAT CGCTGGGGAA AGCGGCAAGT TCGGCAAGGG CGATGCCCGT
GGCCTGGCTG CCCCGGAAAC AGCCATCGGC GCATCCTGCT GCGGCGCGCT GGTACCAATG
CTGACCTTGG GTGTTCCCGG GTCGGGCACC ACGGCGGTGA TGATCGGTGC ACTGACCCTG
TACAACATCA CCCCCGGCCC CCTGCTGTTC GAACAGCAAC CTGACATTGT CTGGGGGCTG
ATCGCTTCGC TGTTCGTCGC CAACATCATG CTGGTGATCC TGAACATCCC GATGATCCGC
ATCTTCACTC GCATCCTCGC CGTGCCGAAC TGGGCGCTGG TGCCGGTAAT CGCGATCATC
ACCGCGATCG GTGTATACGC GGTGCACGCC ACCACCTTCG ACCTGTTCCT GATGGTCGGC
ATCGGCATCA TGGGCTACAT CCTGCGCAAG CTGGACTTCC CGCTGTCGCC TATCCTGCTC
GGCTTCATCC TGGGCGGCCT GATGGAGCAG AACCTGCGCC GTGCGCTGTC GATTTCCAAT
GGCGAGCTGG GCATTCTGTG GTCGAGCTCG ATCAGCATGG GCATCTGGGT ACTGGTGGTG
TGCATGCTCT GCCTGCCGCT GTTGCGCATC TGGCGCAAGC GTAGCCTGCA GCGTCGGGCG
ATGGCCGATG CCTGA
|
|---|
| Protein sequence | MDTLSYLGQG FGVALTPYNL VTALSGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE
SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARNGLAGV ALSLSAWSSF
IGALIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVAL GGMAGDKPLK TFIAALIGLF
LSAVGIDANS GVYRFTGDSV HLADGIQFVV LVLGLFSISE ILLLLEKTHH GHQAVKATGR
MLFNFKEAAS VFVVNIRCGL LGFIMGVLPG AGATLASAVA YMSEKRIAGE SGKFGKGDAR
GLAAPETAIG ASCCGALVPM LTLGVPGSGT TAVMIGALTL YNITPGPLLF EQQPDIVWGL
IASLFVANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TAIGVYAVHA TTFDLFLMVG
IGIMGYILRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWSSS ISMGIWVLVV
CMLCLPLLRI WRKRSLQRRA MADA
|
|---|
| |