| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1041 |
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| Symbol | |
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| ID | 6109959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1143878 |
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| End bp | 1145293 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620805 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001747915 |
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| Protein GI | 170720227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.356945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA ACGCACCCGT TTGGCACACC TTCTGCAATC TCGCTGGCAA GCTGCGCTTC
AGCGCGCTCC ACAAAAACAA CGAGAAGGTA TCCCTGATGG ATAACGCCAC CTCCCTGCCA
ACCGGGGCAG CCGTCGCGCC CGCCGCAGAA AGAACCACCG CCAGCCGCCT CAAGTCGATT
TTCAGCGGTT CCATCGGCAA CATGGTCGAA TGGTACGACT GGTACGTGTA CGCCGCATTC
TCGCTGTATT TCGCCAAGGC CTTCTTCCCG GCCGGCGATT CAACCGCACA ACTGCTCAAC
ACGGCCGCCA TTTTCGCCGT GGGCTTCCTC ATGCGCCCGA TCGGTGGCTG GCTGATGGGC
CTTTACGCCG ACCGCAAGGG GCGCAAAGCC GCGCTGATGG CGTCTGTGCT GCTCATGTGC
GCAGGCTCCC TGGTCATCGC CCTGACCCCG GGTTACGAAA CCATCGGCGT CGCCGCCCCC
GTCCTGCTGG TCATCGCCCG CCTGCTGCAG GGCCTGTCGG TAGGGGGTGA ATATGGCACC
TCGGCTACCT ACCTCAGCGA AATGGCCAGC AAGGAGCGCC GTGGTTTCTT CTCCAGCTTC
CAGTACGTGA CCCTGATCTC CGGCCAGCTC ATCGCCCTGG CGGTGCTGAT CGTTCTGCAG
CAGACGCTGA CCACCGAGCA ACTGTATGCC TGGGGCTGGC GCGTACCGTT CGTGATTGGC
GCGCTGTGCG CGGTGGTCGC GCTGTACCTG CGCCGTGGCA TGGAAGAAAC CGCCTCGTTC
ACCAAGAAGG AAAAGGCCAA GGAAAGCCTG ATGCGCACCC TGATGCGCCA CCCCAAGGAA
CTGATGACCG TGGTCGGCCT GACCATGGGC GGCACCCTGG CCTTCTATAC CTACACCACC
TACATGCAGA AGTACCTGGT CAACACCGTA GGCATGAGCA TCAGTGATTC GACCACCATC
TCGGCGGCCA CACTGTTCCT GTTCATGTGC CTGCAGCCGA TCATCGGCGG CCTGTCGGAC
AAGATCGGCC GTCGCCCGAT CCTGATTGCC TTCGGCGTGC TGGGCACCCT GTTCACCGTA
CCGATCCTCA GCACCCTGCA CACCATTCAG ACCTGGTGGG GCGCGTTCTT CCTGATCATG
GCTGCGTTGA TCATCGTCAG CGGTTACACC TCGATCAACG CCGTGGTCAA GGCCGAACTG
TTCCCCACCG AGATTCGCGC CCTGGGCGTT GGTCTGCCTT ACGCCCTGAC CGTCTCGATC
TTCGGCGGCA CCGCAGAATA CGTAGCCCTG TGGTTCAAGA GCGCCGGCAT GGAGAGCGGT
TTCTACTGGT ACGTCACGGC GTGCATCGCT TGTTCACTGT TGGTGTATGC GACCATGAAG
GACACCAAGC AGCATTCGCG GATTACTACT GACTGA
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| Protein sequence | MNHNAPVWHT FCNLAGKLRF SALHKNNEKV SLMDNATSLP TGAAVAPAAE RTTASRLKSI
FSGSIGNMVE WYDWYVYAAF SLYFAKAFFP AGDSTAQLLN TAAIFAVGFL MRPIGGWLMG
LYADRKGRKA ALMASVLLMC AGSLVIALTP GYETIGVAAP VLLVIARLLQ GLSVGGEYGT
SATYLSEMAS KERRGFFSSF QYVTLISGQL IALAVLIVLQ QTLTTEQLYA WGWRVPFVIG
ALCAVVALYL RRGMEETASF TKKEKAKESL MRTLMRHPKE LMTVVGLTMG GTLAFYTYTT
YMQKYLVNTV GMSISDSTTI SAATLFLFMC LQPIIGGLSD KIGRRPILIA FGVLGTLFTV
PILSTLHTIQ TWWGAFFLIM AALIIVSGYT SINAVVKAEL FPTEIRALGV GLPYALTVSI
FGGTAEYVAL WFKSAGMESG FYWYVTACIA CSLLVYATMK DTKQHSRITT D
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