| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1028 |
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| Symbol | |
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| ID | 6109946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1132579 |
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| End bp | 1134030 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620792 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001747902 |
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| Protein GI | 170720214 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.634124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG CCCTCCCCCA GACCGCCCTG CGCAACGTAC TCACCGCGTT GATGCTGGCC
ATTTTCCTTG GTGCCCTTGA CCAGACCATC GTCGCGGTCT CACTGCCCGC CATCTCCGCC
CAGTTCAATG ACGTCGGGCT GCTGGCCTGG GTAATTTCGG GCTACATGGT GGCGATGACC
GTGGCGGTCC CTATCTATGG CAAGCTGGGG GACCTGTATG GCCGCCGGCG CATGATACTT
ACCGGCATCA GCCTGTTCAC ACTGGCCTCC ATCGCCTGCG CACTGGCCCA GGACATGCAG
CAGCTGGTGC TGGCGCGGGT GCTGCAGGGC ATCGGTGCGG GCGGAATGGT CTCGGTGAGC
CAGGCGATCA TCGGCGACTT CGTGCCGCCG CGCGAGCGTG GGCGCTATCA GGGCTATTTC
AGCAGCATGT ACGCCGCAGC CAGTGTTGCC GGGCCGGTAC TGGGTGGGTG GCTGACCGAA
TACCTGTCGT GGCGCTGGGT GTTCTGGATC AACCTGCCCT TGGGCCTGGT CGCCCTGTGG
GCCATCCATC GCGCCTTGGA GGGTATGCCC GTGCAACGCC GTCAGGCCCA GGTGGACTAT
CTGGGGGCGG TGTTGCTGAT CCTTGGCCTG GGCAGCCTGC TGTTGGGCAT TACCCTGGTC
GGCCAAGGAC ATGCCTGGAC TGCGCCTGCC GTAGTGGCCC TGTTCGCCTG TGCCGGGCTT
GGCACAGCCT TGTTCATCGG GCATGAACGT CGTTGCCAGG AGCCGTTGCT GCCACTCGGA
CTGTTCGGTA ACCGGGTTGC CGTGCTGTGC TGGGCGGTGA TTTTCTTCGC CAGTTTCCAA
TCGATCTCTC TGACCATGCT GATGCCCCTG CGCTACCAGG GCATCACCGG GGCCGGGGCC
GACAGCGCCG CGCTGCACCT GCTGCCCTTG GCCATCGGCC TGCCCATCGG TGCATTCACC
GGCGGGCGCA TGACCAGCTT CACTGGCCGC TATAAGCCGC AGATCCTCGC CGGTGCGTTG
CTGATGCCGG TGGCGATCTT CGCCATGGCC ATCACCCCAC CGCAGTCGGG CGTACTCAGT
GCGCTTTTCA TGTTGTTCAC AGGCATCGCC TGCGGGCTGC AGTTCCCGAC ATCGCTGGTA
GGCACCCAGA GCGCAGTCGA TAGCAAGGAC ATCGGCGTGG CCACCAGCAC GACCAACCTG
TTCCGCTCAC TTGGCGGCGC CATGGGCGTG GCATGCATGT CCAGCGTACT GCTGGCACTG
CTGCATCAGG GCGGGTTCGA ATTGCTGGGT AATCCGTTGC TGGGGAGCCT GCAGGCGGGC
GAAGCTAATC CTGCTACCCA GGCACGATTG CTGGAGACCT TCAGGCACCT GTTGCTGGGC
AGCGCCACGG TGGCGCTGCT GGGGCTGGTG GCGGCAGTGG CATTGCCAGA CCGGCAGTTG
CGCGGGCGCT AG
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| Protein sequence | MTAALPQTAL RNVLTALMLA IFLGALDQTI VAVSLPAISA QFNDVGLLAW VISGYMVAMT
VAVPIYGKLG DLYGRRRMIL TGISLFTLAS IACALAQDMQ QLVLARVLQG IGAGGMVSVS
QAIIGDFVPP RERGRYQGYF SSMYAAASVA GPVLGGWLTE YLSWRWVFWI NLPLGLVALW
AIHRALEGMP VQRRQAQVDY LGAVLLILGL GSLLLGITLV GQGHAWTAPA VVALFACAGL
GTALFIGHER RCQEPLLPLG LFGNRVAVLC WAVIFFASFQ SISLTMLMPL RYQGITGAGA
DSAALHLLPL AIGLPIGAFT GGRMTSFTGR YKPQILAGAL LMPVAIFAMA ITPPQSGVLS
ALFMLFTGIA CGLQFPTSLV GTQSAVDSKD IGVATSTTNL FRSLGGAMGV ACMSSVLLAL
LHQGGFELLG NPLLGSLQAG EANPATQARL LETFRHLLLG SATVALLGLV AAVALPDRQL
RGR
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