| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1026 |
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| Symbol | |
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| ID | 6109944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1130465 |
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| End bp | 1131619 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620790 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001747900 |
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| Protein GI | 170720212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.933063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA AGCCAGCCGT TACCGCTCTG GTTTCCGCCG TCGCCCTGGC AACTCTGCTA
AGTGGCTGTA AGAAAGAAGA AGCCGCGCCC GCAGCACAGG CTCCTCTGGT CGGCGTCGTG
ACAATCCAGC CCCAAGCCTT CACCCTGACG TCCGAGCTGC CGGGGCGCAC CAGCGCCTAT
CGCGTGGCCG AAGTGCGCCC ACAGGTCAAT GGCATCATTC TCAAGCGCCT ATTCAAAGAG
GGCAGCGACG TCAAGGCCGG TCAGCAGCTG TACCAGATCG ACCCTGCCGT ATACGAGGCC
ACCCTGGCCA ACGCCCAGGC CAACCTTCAG GCTACCCGCT CGCTGGCCGA GCGCTACAAG
CAACTGATCG ACGAACAGGC GGTGTCCAAG CAGGAATACG ACGACGCCAA TGCCAAACGA
TTGCAGGCCG AGGCCGCGCT CAAGAGTGCG CAGATCGATC TGCGCTATAC CAAGGTACTG
GCACCGATCA GTGGTCGTAT CGGTCGCTCT TCGTTCACTG AAGGTGCACT GGTGAGCAAT
GGCCAGACCA ATGCCATGGC CACCATCCAG CAACTCGACC CGATCTACGT CGATGTCACC
CAGTCCACCG CCGAGTTGCT CAAACTGCGC CGTGACCTGG AAAGTGGCCA GCTGCAGAAG
TCCGGCGACA ACGCCGCGTC CGTCCAGCTG GTGCTGGAAG ACGGCAGCCT GTTCAAGCAG
GAAGGTCGCC TGGAGTTCTC CGAAGTGGCG GTCGACGAGA CCACAGGTTC GGTGACCCTG
CGCGCCATCT TCCCCAATCC TGACCACACC CTGCTGCCCG GCATGTTCGT GCACGCGCGG
CTCAAGGCCG GGGTCAACAG CAATGCCATC CTGGCCCCGC AGCAAGGCGT GACCCGTGAC
CTCAAGGGTG CCCCCACCGC GCTGGTAGTC AACCAGGAGA ATAAGGTCGA ACTGCGCCAG
CTCAAGGCCA GCCGCACCCT GGGTAGCGAC TGGCTGATCG AGGAAGGCCT GAACCCGGGC
GACCGCCTGA TCACCGAGGG CCTGCAGTAC GTGCGCCCGG GTGTCGAGGT CAAGGTCAGC
GATGCCACCA ACGTCAAGAA ACCGGGCAGC CCTGATCAGG CCAGCGCGGC CAAAGCAGAC
GCCAAAGCGG AGTAA
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| Protein sequence | MQFKPAVTAL VSAVALATLL SGCKKEEAAP AAQAPLVGVV TIQPQAFTLT SELPGRTSAY
RVAEVRPQVN GIILKRLFKE GSDVKAGQQL YQIDPAVYEA TLANAQANLQ ATRSLAERYK
QLIDEQAVSK QEYDDANAKR LQAEAALKSA QIDLRYTKVL APISGRIGRS SFTEGALVSN
GQTNAMATIQ QLDPIYVDVT QSTAELLKLR RDLESGQLQK SGDNAASVQL VLEDGSLFKQ
EGRLEFSEVA VDETTGSVTL RAIFPNPDHT LLPGMFVHAR LKAGVNSNAI LAPQQGVTRD
LKGAPTALVV NQENKVELRQ LKASRTLGSD WLIEEGLNPG DRLITEGLQY VRPGVEVKVS
DATNVKKPGS PDQASAAKAD AKAE
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