| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1024 |
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| Symbol | |
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| ID | 6109942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1125858 |
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| End bp | 1127312 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620788 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001747898 |
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| Protein GI | 170720210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.484622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.130102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT CTTTGTTGTC CCTTGCAGTA ACCGCTTTCA TTCTCGGCGG CTGCTCGCTG
ATCCCTGACT ACCAGACGCC GGAAGCACCG GTGGCTGCGC AGTGGCCGCA AGGCCCTGCG
TACTCGCCGA CCGAGTCGGC CGACGTGGCC GCCGCCGAAC AGGGCTGGCG CCAGTTCTTC
CACGACCCGG CACTGCAGCA GTTGATCCAG ACTTCGCTGG TGAACAACCG CGACCTGCGC
GTGGCGGCAC TGAATCTTGA CGCTTACCGC GCGCAGTACC GCATCCAGCG CGCCGACCTG
TTCCCGGCGG TTTCGGCCAC TGGCAGCGGC AGCCGCCAGC GCGTCCCGGC TGACATGTCG
ACCACCGGCG AAGCCAACAT CACCAGCCAG TACTCGGCCA CGCTAGGCGT CAGCGCCTAT
GAGCTGGACC TGTTCGGCCG CGTACGCAGC CTGACCGAGC AGGCCTTGGA AACCTACCTG
TCCAGTGAGC AGGCGCGTCG CTCCACGCAG ATCGCCCTGG TGGCCAGCGT GGCCAACGCC
TACTACACCT GGCAGGCCGA CCAGGCACTG TTCAAGCTGA CCGAAGAGAC GCTCAAGACC
TACGAGGAAA GCTACAACCT GACCCGCCGC AGCAACGAAG TCGGTGTGGC TTCGGCGCTC
GACCTCAGCC AGGCGCGCAC CGCAGTGGAA GGGGCACGGG TCAAGTATTC GCAGTATCAG
CGCCTTGTTG CCCAAGACCT CAACAGCCTG GCCGTGCTGG TGGGTACCGG CATCCCGGCC
AACCTGCCCA AGCCGCTGGA GCTTGATGCC GACCAGCTGG CGGAAGTGCC GGCTGGCCTG
CCGTCGGACA TCCTCCAGCG CCGCCCTGAC ATCCAGGAGG CCGAACACCT GCTCAAGGCC
GCCAACGCCA ACATTGGCGC AGCGCGAGCA GCGTTCTTCC CGAGCATCAG CCTGACCGCC
AACGCCGGCA CCCTGAGCCC GGACATGGAC GGGCTGTTCA AGGGGGGGTC GGGGACCTGG
CTGTTCCAGC CGCAGATCAA CCTGCCGATC TTCAACGCCG GCAGTCTGAA GGCGAGCCTG
GACTACTCGA AGATTCAGAA AGACATCAAC GTCGCCAAGT ACGAAAAAAC CATCCAGACC
GCCTTCCAGG AAGTCTCCGA TGGCCTGGCG GCACGCAAGA CCTTCGAAGA GCAGTTGCAG
GCGCAACGTG ACCTGGTGCA GGCGAACCAG GATTACTACC GCCTGGCCGA ACGCCGTTAC
CGCATCGGTA TCGACAGCAA CCTGACCTTC CTCGATGCCC AGCGCAACTT GTTCAGTGCA
CAGCAGTCAC TGATCACCGA TCGCCTGTCG CAGCTGACCA GCGAGGTCAA CCTGTACAAA
GCGCTCGGCG GTGGCTGGTA CGAGCAGACC GGGCAGGCCA ATCAGCAGGC ATCGGCGGCA
ACACCGAAGA GCTGA
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| Protein sequence | MTKSLLSLAV TAFILGGCSL IPDYQTPEAP VAAQWPQGPA YSPTESADVA AAEQGWRQFF
HDPALQQLIQ TSLVNNRDLR VAALNLDAYR AQYRIQRADL FPAVSATGSG SRQRVPADMS
TTGEANITSQ YSATLGVSAY ELDLFGRVRS LTEQALETYL SSEQARRSTQ IALVASVANA
YYTWQADQAL FKLTEETLKT YEESYNLTRR SNEVGVASAL DLSQARTAVE GARVKYSQYQ
RLVAQDLNSL AVLVGTGIPA NLPKPLELDA DQLAEVPAGL PSDILQRRPD IQEAEHLLKA
ANANIGAARA AFFPSISLTA NAGTLSPDMD GLFKGGSGTW LFQPQINLPI FNAGSLKASL
DYSKIQKDIN VAKYEKTIQT AFQEVSDGLA ARKTFEEQLQ AQRDLVQANQ DYYRLAERRY
RIGIDSNLTF LDAQRNLFSA QQSLITDRLS QLTSEVNLYK ALGGGWYEQT GQANQQASAA
TPKS
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