| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1023 |
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| Symbol | |
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| ID | 6109941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1124347 |
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| End bp | 1125600 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620787 |
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| Product | outer membrane porin |
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| Protein accession | YP_001747897 |
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| Protein GI | 170720209 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0827168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTT CGCACCCCGC ACGCCAGCTG CTGCCCGGCC TGTTGGCCAT GTCCTGCGCC
CTCCCCGCAT TGGCCGCCGA AGGCGGTTTC ATGGAGGACG CCAAGGCCAC CCTCAACCTG
CGCAACTTCT ACATCAACCG CAACTTCGTC GACCCGGCTC ACTCCCAGGC CAAGGGAGAG
GAATGGACGC AAAGCTTCAT CCTCGATGCC CGCTCCGGCT TCACCCAGGG CGTCGTAGGT
TTCGGCGTGG ATGTACTGGG CATGTATTCG GTCAAGCTCG ACGGCGGAAA AGGCACCACC
AATACCCACC TGCTACCGGT CCACGATGAC GGCCGGCCCG CCGACGACTT CGGCCGCCTG
GGCGTCGCAC TAAAAGCCAA GCTGTCGGAA ACCGAACTGA AAGTCGGCGA ATGGATGCCC
GTGCTGCCGA TCCTGCGCTC GGATGACGGC CGCTCGCTGC CGCAGACCTT CCGCGGTGGC
CAGCTCACCT CGAAAGAAAT CGAGGGCCTG ACCCTGTACG CCGGTCAGTT CCGCGCCAAC
AGCCCGCGCA ACGACGCCAG CATGGAAGAC ATGTCGCTCA ATGGCCGAGC GGCGTTCACC
TCCGATCGTT TCAACTTCGG TGGTGGCGAA TATACCTTCA ACGACAAGCG CACGATGATC
GGCCTGTGGG ATGCCCAGCT CAAGGACATC TACCGTCAGC AATACATCAA CCTGGTGCAT
AGCCAGCCCC TGGGCGAATG GACCCTGGGC GCCAACCTCG GCTATTTCAT CGGCAAGGAA
GACGGCGCCG AACGCGCAGG CCAGCTAGAC AACCGCACGG CCTCGGCGAT GCTCTCTGCA
CGCTACAAGG GCAACACCTT CTACGTCGGC CTGCAGAAAG TCAGCGGCGA CGATGCCTGG
TTGCGGGTCA ACGGCACCAG CGGTGGCACC CTGGCCAACG ACAGCTACAA CTCCAGCTTC
GACAATGCCA AGGAACGTTC CTGGCAGGTG CGCCATGACT TCAACTTCGT CACCGTCGGT
ATCCCCGGCC TGACCCTGAT GAACCGCTAC ATCAAGGGTG ACAATGTCAC CTCTGGCAGC
ATCGACGACG GCAAGGAATG GGCGCGAGAA ACCGAACTGG CCTACGTGGT GCAGTCGGGG
TCATTCAAGG ACCTTTCGGT GAAATGGCGC AACTCGACCA TGCGCAGGGA CTTCAGCACC
AACGCGTTCG ATGAGAACCG GTTGATCGTG AGTTACCCGC TGAACCTGTT GTGA
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| Protein sequence | MSISHPARQL LPGLLAMSCA LPALAAEGGF MEDAKATLNL RNFYINRNFV DPAHSQAKGE
EWTQSFILDA RSGFTQGVVG FGVDVLGMYS VKLDGGKGTT NTHLLPVHDD GRPADDFGRL
GVALKAKLSE TELKVGEWMP VLPILRSDDG RSLPQTFRGG QLTSKEIEGL TLYAGQFRAN
SPRNDASMED MSLNGRAAFT SDRFNFGGGE YTFNDKRTMI GLWDAQLKDI YRQQYINLVH
SQPLGEWTLG ANLGYFIGKE DGAERAGQLD NRTASAMLSA RYKGNTFYVG LQKVSGDDAW
LRVNGTSGGT LANDSYNSSF DNAKERSWQV RHDFNFVTVG IPGLTLMNRY IKGDNVTSGS
IDDGKEWARE TELAYVVQSG SFKDLSVKWR NSTMRRDFST NAFDENRLIV SYPLNLL
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