Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1016 |
Symbol | |
ID | 6109934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1116733 |
End bp | 1118076 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620780 |
Product | benzoate transport |
Protein accession | YP_001747890 |
Protein GI | 170720202 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0402464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000294981 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGC CACAATCTGT CGGGAACTGC CTCGACGTTC AATCATTCAT CAATGAACAA CCGCTGTCGC GCTATCAATG GCGCGCGGTG ATCCTTTGCT TCCTGATTGT CTTCCTCGAT GGTCTGGATA CTGCGGCCAT GGGCTTTATC GCTCCGGCAT TGTCCCAGGA ATGGGGCATC GACCGCGCCA GCCTTGGCCC GGTGATGAGC GCCGCATTGA TCGGGATGGT GTTCGGTGCC TTGGGGTCTG GGCCGCTGGC CGACCGCTTT GGCCGCAAGG TCGTGCTGGT AGGTGCGGTA TTGGTGTTCG GTGGTTTCAG CCTGGCCTCG GCCTACGCCA GCAACGTCGA CCAGTTGCTG ATGCTGCGCT TTCTGACCGG CCTCGGGCTG GGTGCCGGCA TGCCCAATGC CACCACGCTG CTTTCCGAAT ACACCCCGGA GCGCCTCAAG TCGCTGTTGG TGACCAGCAT GTTCTGCGGT TTCAACCTGG GCATGGCCGG TGGTGGGTTC ATTTCCGCGA AGATGATCCC GGCCTACGGC TGGCATAGCC TGTTGGTGGT GGGCGGTGTG CTGCCGCTGC TGCTGGTTGT GGTGCTGATG GTCTGGCTGC CTGAGTCGGC ACGCTTTCTG GTTGTACGCA ACCGCGGTAC CGACAAGGTG CGCAAGACCC TGGCGCCGAT TGCACCGGCC GTCGTTGCGC AGGCAGCCAG CTTCAGTGTG CCGGAACAGA AGGCTGTGGC CGCGCGCAAC GTGTTCGCAG TGATCTTCTC CGGCGCCTAT GGCCTGGGGA CGATGCTGCT GTGGCTGACC TACTTCATGG GCCTGGTCAT CGTCTACCTG CTGACCAGCT GGCTGCCGAC GCTGATGCGT GACAGCGGCG CAAGCATGGA GCAGGCCGCG TTCATCGGTG CGCTGTTCCA GTTCGGTGGC GTACTCAGTG CCGTGGCAGT AGGCTGGGCC ATGGACCGTT ACAACCCGCA CAAGGTCATC GGTATCTTCT ACTTGCTGGC TGGCGTGTTC GCTTATGCGG TAGGGCAGAG CCTGGGCAAC ATTACCGTGC TTGCCACTCT GGTGCTGGTA GCCGGGATGT GTGTGAACGG CGCGCAATCG GCCATGCCTT CGCTGGCGGC GCGGTTCTAT CCGACCCAAG CGCGTGCCAC CGGTGTTTCC TGGATGCTCG GCATCGGCCG CTTTGGCGCG ATCCTCGGCG CCTGGAGTGG TGCGACCCTG CTTGGCCTGG GCTGGAACTT CGAGCAGGTG CTGACGGCAT TGCTGGTGCC AGCTGCGCTG GCCACGGTAG GCGTGATCGT GAAAGGCCTG GTGAGCCACG CCGACGCGAC CTGA
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Protein sequence | MNKPQSVGNC LDVQSFINEQ PLSRYQWRAV ILCFLIVFLD GLDTAAMGFI APALSQEWGI DRASLGPVMS AALIGMVFGA LGSGPLADRF GRKVVLVGAV LVFGGFSLAS AYASNVDQLL MLRFLTGLGL GAGMPNATTL LSEYTPERLK SLLVTSMFCG FNLGMAGGGF ISAKMIPAYG WHSLLVVGGV LPLLLVVVLM VWLPESARFL VVRNRGTDKV RKTLAPIAPA VVAQAASFSV PEQKAVAARN VFAVIFSGAY GLGTMLLWLT YFMGLVIVYL LTSWLPTLMR DSGASMEQAA FIGALFQFGG VLSAVAVGWA MDRYNPHKVI GIFYLLAGVF AYAVGQSLGN ITVLATLVLV AGMCVNGAQS AMPSLAARFY PTQARATGVS WMLGIGRFGA ILGAWSGATL LGLGWNFEQV LTALLVPAAL ATVGVIVKGL VSHADAT
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