Gene PputW619_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1016 
Symbol 
ID6109934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1116733 
End bp1118076 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content63% 
IMG OID641620780 
Productbenzoate transport 
Protein accessionYP_001747890 
Protein GI170720202 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0402464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000294981 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGC CACAATCTGT CGGGAACTGC CTCGACGTTC AATCATTCAT CAATGAACAA 
CCGCTGTCGC GCTATCAATG GCGCGCGGTG ATCCTTTGCT TCCTGATTGT CTTCCTCGAT
GGTCTGGATA CTGCGGCCAT GGGCTTTATC GCTCCGGCAT TGTCCCAGGA ATGGGGCATC
GACCGCGCCA GCCTTGGCCC GGTGATGAGC GCCGCATTGA TCGGGATGGT GTTCGGTGCC
TTGGGGTCTG GGCCGCTGGC CGACCGCTTT GGCCGCAAGG TCGTGCTGGT AGGTGCGGTA
TTGGTGTTCG GTGGTTTCAG CCTGGCCTCG GCCTACGCCA GCAACGTCGA CCAGTTGCTG
ATGCTGCGCT TTCTGACCGG CCTCGGGCTG GGTGCCGGCA TGCCCAATGC CACCACGCTG
CTTTCCGAAT ACACCCCGGA GCGCCTCAAG TCGCTGTTGG TGACCAGCAT GTTCTGCGGT
TTCAACCTGG GCATGGCCGG TGGTGGGTTC ATTTCCGCGA AGATGATCCC GGCCTACGGC
TGGCATAGCC TGTTGGTGGT GGGCGGTGTG CTGCCGCTGC TGCTGGTTGT GGTGCTGATG
GTCTGGCTGC CTGAGTCGGC ACGCTTTCTG GTTGTACGCA ACCGCGGTAC CGACAAGGTG
CGCAAGACCC TGGCGCCGAT TGCACCGGCC GTCGTTGCGC AGGCAGCCAG CTTCAGTGTG
CCGGAACAGA AGGCTGTGGC CGCGCGCAAC GTGTTCGCAG TGATCTTCTC CGGCGCCTAT
GGCCTGGGGA CGATGCTGCT GTGGCTGACC TACTTCATGG GCCTGGTCAT CGTCTACCTG
CTGACCAGCT GGCTGCCGAC GCTGATGCGT GACAGCGGCG CAAGCATGGA GCAGGCCGCG
TTCATCGGTG CGCTGTTCCA GTTCGGTGGC GTACTCAGTG CCGTGGCAGT AGGCTGGGCC
ATGGACCGTT ACAACCCGCA CAAGGTCATC GGTATCTTCT ACTTGCTGGC TGGCGTGTTC
GCTTATGCGG TAGGGCAGAG CCTGGGCAAC ATTACCGTGC TTGCCACTCT GGTGCTGGTA
GCCGGGATGT GTGTGAACGG CGCGCAATCG GCCATGCCTT CGCTGGCGGC GCGGTTCTAT
CCGACCCAAG CGCGTGCCAC CGGTGTTTCC TGGATGCTCG GCATCGGCCG CTTTGGCGCG
ATCCTCGGCG CCTGGAGTGG TGCGACCCTG CTTGGCCTGG GCTGGAACTT CGAGCAGGTG
CTGACGGCAT TGCTGGTGCC AGCTGCGCTG GCCACGGTAG GCGTGATCGT GAAAGGCCTG
GTGAGCCACG CCGACGCGAC CTGA
 
Protein sequence
MNKPQSVGNC LDVQSFINEQ PLSRYQWRAV ILCFLIVFLD GLDTAAMGFI APALSQEWGI 
DRASLGPVMS AALIGMVFGA LGSGPLADRF GRKVVLVGAV LVFGGFSLAS AYASNVDQLL
MLRFLTGLGL GAGMPNATTL LSEYTPERLK SLLVTSMFCG FNLGMAGGGF ISAKMIPAYG
WHSLLVVGGV LPLLLVVVLM VWLPESARFL VVRNRGTDKV RKTLAPIAPA VVAQAASFSV
PEQKAVAARN VFAVIFSGAY GLGTMLLWLT YFMGLVIVYL LTSWLPTLMR DSGASMEQAA
FIGALFQFGG VLSAVAVGWA MDRYNPHKVI GIFYLLAGVF AYAVGQSLGN ITVLATLVLV
AGMCVNGAQS AMPSLAARFY PTQARATGVS WMLGIGRFGA ILGAWSGATL LGLGWNFEQV
LTALLVPAAL ATVGVIVKGL VSHADAT