| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1015 |
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| Symbol | |
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| ID | 6109933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1115532 |
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| End bp | 1116407 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620779 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001747889 |
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| Protein GI | 170720201 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.608912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000271522 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGACG AAATCCCGGC CAACGAATCT GCCAGCCCGG AGTCGGTACG CCCGAGCGCC
CCTGCCTTGG CGCCGCCGAT CGTGGCCTCC CCAGCCAAGC GTATTCAGGC ATTTACTGGT
GACCCGGACT TCATGACCTC GCTGGCGCGG GGCCTTGCCG TGATCCAGGC ATTTCAGGAG
CGCAAGCGCC ATCTGACCAT CGCTCAGATC AGCCACCGCA CCGAGATCCC ACGAGCGGCG
GTGCGTCGTT GCCTGCATAC GCTGATCAAG CTCGGCTACG CCACGACCGA CGGGCGTACC
TATTCGCTGC TGCCCAAGGT GCTGACCCTC GGCCATGCCT ACCTTTCGTC GACGCCCCTG
GCGATGTCGG CCCAGCCCTA TCTGGACCGC ATCAGCGATC AATTGCACGA GGCTGCCAAC
ATGGCCACCC TCGAAGGCGA CGATATTCTT TATATAGCCC GCTCGGCCAC TGTGGAGCGG
TTGATATCGG TCGATCTGTC AGTCGGTGGG CGGCTGCCGG CCTACTGCAC GTCGATGGGG
CGCATTCTGT TGGCAGCGAT GGACGACACC AGCTTGCGCG AGTACCTCGA CCGCGCCGAC
CTCAAGGCTC GCACCAGCCG TACCTTGCAT GATCCGGAGT CGCTGTTCGC TTGTATTCAG
CAGGTGCGTG AGCAGGGCTG GTGCGTAGTC GACCAGGAAC TGGAGCAGGG GCTGCGCTCG
ATTGCTGTGC CGATCTATGA TGCTTCCGGG CAGGTACTTG CGGCGTTGAA TGTCAGTACC
CATGTGGGGC GTGTGAGCCG AAGCGAGCTG GAACAGCGGT TCTTACCGAT CCTGCTGGCA
TCCAGTCGCG ATCTTTGCCA TCAGTTGTTT GGCTGA
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| Protein sequence | MSDEIPANES ASPESVRPSA PALAPPIVAS PAKRIQAFTG DPDFMTSLAR GLAVIQAFQE
RKRHLTIAQI SHRTEIPRAA VRRCLHTLIK LGYATTDGRT YSLLPKVLTL GHAYLSSTPL
AMSAQPYLDR ISDQLHEAAN MATLEGDDIL YIARSATVER LISVDLSVGG RLPAYCTSMG
RILLAAMDDT SLREYLDRAD LKARTSRTLH DPESLFACIQ QVREQGWCVV DQELEQGLRS
IAVPIYDASG QVLAALNVST HVGRVSRSEL EQRFLPILLA SSRDLCHQLF G
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